Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_D14
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 30 1.2
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 28 5.0
AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical ... 28 5.0
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 6.7
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 6.7
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 6.7
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 27 6.7
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 27 6.7
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 6.7
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 27 8.8
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 27 8.8
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +2
Query: 332 CPCRARNPYTTPGASCSPKFLAS*FCHICQCTYHQQV 442
C CR + Y C P F C CQC H +
Sbjct: 864 CVCREKGIYGRQCNQCQPGFWGFPECRTCQCNDHANI 900
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 407 CHICQCTYHQQVRPRVHSS 463
C +CQ TY Q PR+H S
Sbjct: 91 CGVCQLTYSSQRIPRIHPS 109
>AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical
protein F43E2.3 protein.
Length = 631
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -3
Query: 347 VLGKGKCTPEGKE-----LKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNE 204
++ K C GK+ +HL G E C EA +KG +S+ ++KN+
Sbjct: 331 IISKNLCESNGKDRLTPICLEHLIHICLFGDELCIEAIQKGCISSVIRIMKND 383
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 140 EDRAKA 123
+ +A
Sbjct: 3448 DAELQA 3453
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 140 EDRAKA 123
+ +A
Sbjct: 3448 DAELQA 3453
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 2845 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 2902
Query: 140 EDRAKA 123
+ +A
Sbjct: 2903 DAELQA 2908
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 140 EDRAKA 123
+ +A
Sbjct: 3448 DAELQA 3453
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 140 EDRAKA 123
+ +A
Sbjct: 3448 DAELQA 3453
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 2845 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 2902
Query: 140 EDRAKA 123
+ +A
Sbjct: 2903 DAELQA 2908
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 140 EDRAKA 123
+ +A
Sbjct: 3448 DAELQA 3453
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 140 EDRAKA 123
+ +A
Sbjct: 3448 DAELQA 3453
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 2845 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 2902
Query: 140 EDRAKA 123
+ +A
Sbjct: 2903 DAELQA 2908
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 140 EDRAKA 123
+ +A
Sbjct: 3448 DAELQA 3453
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 320 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 141
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 140 EDRAKA 123
+ +A
Sbjct: 3448 DAELQA 3453
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical
protein C14C10.5 protein.
Length = 1908
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -3
Query: 407 KINLQEILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALE 279
K++ + +L+N L+E+ MD V+ KCT ++ + L L+
Sbjct: 734 KVHPKLLLDNWHLVETLMDLVMPLKKCTTATEKALNVLDNVLD 776
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 407 CHICQCTYHQQVRPRVHSS 463
C CQ TY Q PR+H S
Sbjct: 210 CTSCQLTYSSQTFPRIHPS 228
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +2
Query: 455 HSSKL*GPSW---LMILLST*VIPMVCSVLSIH 544
H SKL GP LM+LL+T ++P + LS+H
Sbjct: 144 HLSKLIGPITIVPLMLLLTTSIVPTIEEKLSLH 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,309,680
Number of Sequences: 27780
Number of extensions: 216946
Number of successful extensions: 732
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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