Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_D12
         (926 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    28   0.35 
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     25   4.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.9  

>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
 Frame = +2

Query: 281 FVLYCVVGIILATNVSGRSKRLQVFIIYLQI-YKYLQFNIDKQLTIL*SFLNFYIYNINN 457
           F L+ +V         G  KR+   ++   + +K       KQL+++ S    Y  N + 
Sbjct: 10  FALFAIVPFAAGLCNVGLGKRVFGDVLLETLSFKNSSTTEPKQLSLVIS----YQPNAHL 65

Query: 458 AKILFYYFQKEYVLLELVIINIKNKKSVFIAILTNNNKIVEIQLFLSFVFFFDNHKTEAI 637
            + + Y   +  V   LVI   KNKK +F+  +T+ N + E+   L    F    + +A+
Sbjct: 66  GEQITYSKTQGSVECTLVIPQAKNKKGLFLT-MTSQNNVTELSATLEIYGF---RQGKAV 121

Query: 638 KILGT 652
           + +GT
Sbjct: 122 RSVGT 126


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 342 DYRYSLYTYKYINTYNSILTSNSRFY 419
           DY  + YT +Y+N Y   +  N+ +Y
Sbjct: 211 DYYNNFYTEEYLNYYTEDIGLNAYYY 236


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 458  AKILFYYFQKEYVLLELVIINIKNKKSVFIAILTNN 565
            + I F YF   YVL   +IIN+      F+A++ +N
Sbjct: 1398 SNIAFPYFISFYVLCSFLIINL------FVAVIMDN 1427


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,190
Number of Sequences: 2352
Number of extensions: 14684
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)