Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_D10
(818 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0315 - 3454846-3455465,3455562-3455663,3455828-3455954,345... 191 5e-49
03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447 179 2e-45
02_04_0336 + 22121913-22122111,22122295-22122344,22122538-221226... 174 6e-44
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 174 8e-44
04_04_0115 + 22868554-22868749,22868863-22868912,22870009-228701... 155 4e-38
04_04_0116 + 22877296-22877482,22877578-22877627,22879057-228791... 154 7e-38
01_05_0293 - 20532559-20532572,20532573-20532798,20532926-205339... 32 0.48
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 31 1.5
08_01_0182 - 1534448-1534557,1534925-1535987 29 4.4
07_03_1210 + 24903389-24903695,24904383-24904468,24904545-249046... 29 4.4
10_07_0053 - 12406958-12407011,12407012-12407168,12407280-124074... 29 5.9
05_03_0471 - 14455543-14455650,14455925-14456002,14456121-144562... 28 7.8
05_01_0509 - 4250217-4250240,4250617-4250711,4251050-4251365 28 7.8
01_05_0387 - 21695277-21695351,21696186-21696228,21696325-216964... 28 7.8
>10_01_0315 -
3454846-3455465,3455562-3455663,3455828-3455954,
3456698-3456727,3456828-3456877,3457004-3457106
Length = 343
Score = 191 bits (466), Expect = 5e-49
Identities = 98/264 (37%), Positives = 145/264 (54%), Gaps = 5/264 (1%)
Frame = -1
Query: 818 DGTTYQLXNNIGKDHLHGGINGFNKANWNSTV---DGXKVIFSYLSKDGEEGYPGDLITN 648
+G Y L N G + LHGG+ GF+K W+ + + F Y SKDGEEGYPGD+
Sbjct: 87 NGVEYSLAINNGPNSLHGGLKGFDKVVWDVVERKSECPSITFQYHSKDGEEGYPGDVTVR 146
Query: 647 ITYEVTDDNALYVDFMSXXXXXXXXXXXN-HSYFNLAGHDTGVQEIYNHIFVINADKITE 471
TY + D L +D + H+Y+NLAGH++G + +H I IT
Sbjct: 147 ATYSLPDSTTLRLDMEAVAENKATPINLAQHTYWNLAGHNSG--DTLDHSIQIWGKHITP 204
Query: 470 TDSGSIPTGGFISVGGTPYDLRVPTKLGDVINKTGNGFDDNFCISTYTNKS-LNFVSRIL 294
D +IPTG + V GTP+D K+G IN G+D N+ + + K+ L +++
Sbjct: 205 VDENTIPTGEIMPVKGTPFDFTTEHKIGARINDVPGGYDHNYVLDSGEEKNGLKHAAKLK 264
Query: 293 HPSSGRTLEVYSDQPGVQFYTSNSLPAPQESALVGKQGVGYRRHGAFCLETQNYPDAVHH 114
S+ RTL++++D PG+QFYT+N + + GK G Y +H CLETQ +P+A++
Sbjct: 265 DSSNSRTLDLWTDAPGMQFYTANYV-----DGVTGKGGAVYGKHSGVCLETQGFPNAINQ 319
Query: 113 TNFPRAVLYPGEVYKHKXVYRFAA 42
NFP V+ PGE YKH ++ F+A
Sbjct: 320 PNFPSVVVQPGEKYKHTMLFEFSA 343
>03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447
Length = 309
Score = 179 bits (436), Expect = 2e-45
Identities = 100/269 (37%), Positives = 142/269 (52%), Gaps = 9/269 (3%)
Frame = -1
Query: 815 GTTYQLXNNIGKDHLHGGINGFNKANWN----STVDGXKVIFSYLSKDGEEGYPGDLITN 648
G + N GK+ LHGG GFN+ W+ +T + F Y S DGE+G+PG L
Sbjct: 47 GHAFHTYKNDGKNTLHGGHRGFNQVFWSVRERATGHFPYITFYYRSYDGEQGFPGALDVL 106
Query: 647 ITYEVTDDNALYVDFMSXXXXXXXXXXXN---HSYFNLAGHDTGVQEIYNHIFVINADKI 477
+TY++ D + V + N H+Y+NL GH G I +H I A +
Sbjct: 107 VTYKIDGDYSFSVTMYARPVDDGKPTPVNLAQHTYWNLRGHGNGT--ILDHSVQIFASAV 164
Query: 476 TETDSGSIPTGGFISVGGTPYDLRVPTKLGD-VINKTGNGFDDNFCISTYTN-KSLNFVS 303
T +G IPTG V GTP+D R P G + + G G+D N+ + + + + +
Sbjct: 165 TPVGAGLIPTGAVSPVSGTPFDFRAPAPPGARIADVPGGGYDINYVLDGEADGQGVRKAA 224
Query: 302 RILHPSSGRTLEVYSDQPGVQFYTSNSLPAPQESALVGKQGVGYRRHGAFCLETQNYPDA 123
+ P+SGR LE++SDQPG+QFYT N L + GK G Y +HG CLETQ+YPDA
Sbjct: 225 VVSEPTSGRVLELWSDQPGLQFYTGNFLKGDE-----GKGGARYVKHGGLCLETQDYPDA 279
Query: 122 VHHTNFPRAVLYPGEVYKHKXVYRFAAQK 36
VH+ FP + G+ YKH +Y+F+ K
Sbjct: 280 VHNAKFPTEIYRKGQEYKHYMLYKFSLAK 308
>02_04_0336 +
22121913-22122111,22122295-22122344,22122538-22122661,
22122810-22122917,22123610-22124265
Length = 378
Score = 174 bits (424), Expect = 6e-44
Identities = 101/274 (36%), Positives = 146/274 (53%), Gaps = 17/274 (6%)
Frame = -1
Query: 818 DGTTYQLXNNIGKDHLHGGINGFNKANWN-----STVDGXKVIFSYLSKDGEEGYPGDLI 654
DG TY+L N G + LHGG GF+K W + D ++ Y S DGE+G+PGDL
Sbjct: 108 DGKTYRLFRNDGNNSLHGGHRGFSKVIWTVKEHVAGGDSPRITLYYHSFDGEQGFPGDLD 167
Query: 653 TNITYEVTDDNALYVDF-MSXXXXXXXXXXXNHSYFNLAGHDTGVQEIYNHIFVINADKI 477
+TYE+ L V + +H+Y+NLAG +G + I+A +
Sbjct: 168 VFVTYELPRPYVLAVRMNATARGKATPVNLAHHAYWNLAGEGSGAASVLAETVRIHASRY 227
Query: 476 TETDSGS-IPTGGFISVGGTPYDLRVPTKLGDVINKTG------NGFDDNFCISTYT--- 327
T D+ + IPTG V GTPYD +G I +G+D N+ +
Sbjct: 228 TPVDAATLIPTGRVAPVAGTPYDFLAGAPVGARIVGAAVPGGAVSGYDTNYAVDGAAADG 287
Query: 326 -NKSLNFVSRILHPSSGRTLEVYSDQPGVQFYTSNSLPAPQESALVGKQGVGYRRHGAFC 150
+ L V+ + ++GR +EV++DQPGVQFYTSN L + + GK G Y R+GA C
Sbjct: 288 ERRRLRPVAEVRDGATGRAMEVWADQPGVQFYTSNGL-----AGVRGKGGRVYGRYGALC 342
Query: 149 LETQNYPDAVHHTNFPRAVLYPGEVYKHKXVYRF 48
LETQ +PDAV+H +FP ++ PG+VY+H V++F
Sbjct: 343 LETQGFPDAVNHPSFPSQIVRPGQVYEHNMVFKF 376
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 174 bits (423), Expect = 8e-44
Identities = 94/249 (37%), Positives = 133/249 (53%), Gaps = 6/249 (2%)
Frame = -1
Query: 806 YQLXNNIGKDHLHGGINGFNKANWNSTV----DGXKVIFSYLSKDGEEGYPGDLITNITY 639
Y L N + LHGG GF+K W + + F Y SKDGEEG+PGD+ Y
Sbjct: 230 YSLAINNPPNTLHGGFKGFDKIIWEVAEYVKGENPSITFKYYSKDGEEGFPGDVSVTARY 289
Query: 638 EVTDDNALYVDFMSXXXXXXXXXXXN-HSYFNLAGHDTGVQEIYNHIFVINADKITETDS 462
+ L ++ + H+Y+NLAGH++G ++ H I +IT D
Sbjct: 290 SILASTTLKLEMEAIPLNKATPISLAQHTYWNLAGHNSG--DVLAHTVQILGSQITPVDE 347
Query: 461 GSIPTGGFISVGGTPYDLRVPTKLGDVINKTGNGFDDNFCISTYTNKS-LNFVSRILHPS 285
SIPTG + V G+P++ T +G I++ G+D NF I KS L V+++ PS
Sbjct: 348 TSIPTGEMMPVSGSPFNFLTETTIGSRIDQVPGGYDHNFVIDCGEVKSGLCHVAKVTDPS 407
Query: 284 SGRTLEVYSDQPGVQFYTSNSLPAPQESALVGKQGVGYRRHGAFCLETQNYPDAVHHTNF 105
S R L++++D PGVQFYT N L + +VGK G Y +H CLETQ +P+AV+ NF
Sbjct: 408 SSRVLDIWADAPGVQFYTGNFL-----NGIVGKGGAVYGKHAGLCLETQGFPNAVNQPNF 462
Query: 104 PRAVLYPGE 78
P V+ PGE
Sbjct: 463 PSVVVQPGE 471
>04_04_0115 +
22868554-22868749,22868863-22868912,22870009-22870195,
22870226-22870333,22872501-22873165
Length = 401
Score = 155 bits (376), Expect = 4e-38
Identities = 97/263 (36%), Positives = 138/263 (52%), Gaps = 21/263 (7%)
Frame = -1
Query: 770 HGGINGFNKANWNSTV-----DGXKVIFSYLSKDGEEGYPGDLITNITYEVTDDNALYVD 606
+ G GF+ W D + Y S DGE+G+PG L +TY+++ L V
Sbjct: 144 NSGHRGFSNVTWTVKEHVGGGDAPYITLYYHSFDGEQGFPGALDVYVTYQLSGPYVLSVH 203
Query: 605 F-MSXXXXXXXXXXXNHSYFNLAGHDTGVQEIYNHIFVINADKITETDSGSIPTGGFISV 429
+ HSY+NL G TG +I + + A + T D+ IPTG V
Sbjct: 204 MNATAAGKATPVNLAQHSYWNLGG--TGSGDILGNTVQLFASRYTPVDAELIPTGQVAPV 261
Query: 428 GGTPYDLRVPTKLGDVIN-------KTGN---GFDDNFCISTYTN-----KSLNFVSRIL 294
GTP DLR PT +G ++ KTG GFD N+ + + +L V+ +
Sbjct: 262 TGTPCDLRAPTPVGARVHLVTGGLSKTGATIYGFDTNYAVDGGDDVDAHAHALRRVTVVR 321
Query: 293 HPSSGRTLEVYSDQPGVQFYTSNSLPAPQESALVGKQGVGYRRHGAFCLETQNYPDAVHH 114
SGR+LE++++QPGVQFYT N L A + GK G Y ++GA CLETQ +PDAV+H
Sbjct: 322 DGKSGRSLELWANQPGVQFYTGNFLTADVK----GKGGKAYGQYGALCLETQGFPDAVNH 377
Query: 113 TNFPRAVLYPGEVYKHKXVYRFA 45
NFP ++ PG+VYKH+ VY+F+
Sbjct: 378 PNFPSVIVRPGQVYKHEMVYKFS 400
>04_04_0116 +
22877296-22877482,22877578-22877627,22879057-22879180,
22879266-22879373,22879462-22880084
Length = 363
Score = 154 bits (374), Expect = 7e-38
Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 11/269 (4%)
Frame = -1
Query: 818 DGTTYQLXNNIGKDHLHGGINGFNKANWNSTV-----DGXKVIFSYLSKDGEEGYPGDLI 654
DG Y N G++ +HGG GF+K W D + Y S DGE+G+PGDL
Sbjct: 104 DGKVYHTYINDGRNAIHGGHRGFSKVIWTVKEYVGGGDSPYITLYYRSFDGEQGFPGDLD 163
Query: 653 TNITYEVTDDNALYVDF-MSXXXXXXXXXXXNHSYFNLAGHDTGVQEIYNHIFVINADKI 477
+TY+++ L + + H+Y+NL G G ++ H ++A +
Sbjct: 164 AYVTYQLSSPYVLALRMNATALNKATPVNFLQHTYWNLGGQGRG--DVLGHTLQLSASRY 221
Query: 476 TETDSGSIPTGGFIS-VGGTPYDLRVPTKLGDVINKTGNG----FDDNFCISTYTNKSLN 312
T +P+ G ++ V GTPYD R PT +G I + G +D N+ I + +
Sbjct: 222 TPLHEELLPSSGVVAPVAGTPYDFRHPTPIGARIRQVMGGRIAGYDINYVID---GEGMR 278
Query: 311 FVSRILHPSSGRTLEVYSDQPGVQFYTSNSLPAPQESALVGKQGVGYRRHGAFCLETQNY 132
V+ +SGR LE++++QP +Q YT N L + + GK G Y+++G FCLETQ Y
Sbjct: 279 KVAAARDGASGRALELWANQPAMQLYTGNWL-----NNIKGKGGKVYQQYGGFCLETQGY 333
Query: 131 PDAVHHTNFPRAVLYPGEVYKHKXVYRFA 45
DAV+H FP + PG+VY+H ++F+
Sbjct: 334 VDAVNHPEFPSMTVRPGQVYRHDMAFKFS 362
>01_05_0293 -
20532559-20532572,20532573-20532798,20532926-20533960,
20534670-20534996
Length = 533
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +2
Query: 104 GNSCDGQRPGNFGSRGRTRRDVCSQLPVYQPEQTLEEQG-GS*RCKTGLRADRCRLRECV 280
G+SC+G + S G+T V P Q LE Q C L A R L+E V
Sbjct: 336 GSSCNGTSHKDSASMGKTISLVVEDRPRKSTRQLLELQHYNCAGCHRHLDAGRTMLQEIV 395
Query: 281 PMMDEGSEIRNLMIYLCTLRCRSCHRN 361
+ G Y L C SCH N
Sbjct: 396 QTI--GWNKPRFCAYTGQLFCASCHTN 420
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Frame = -1
Query: 476 TETDSGSIPTGGFISVGGTPY--DLRVPTKLGDVINKTGNGFDDNFCISTYTNKSLNFVS 303
TE ++G +GG + V Y D+ T+ V+ KT + D N+ + +V+
Sbjct: 2049 TEEENGP-NSGGTLEVSAKNYNEDVHENTEKDAVVEKTSSSEHDEIA-GEIRNEEVTYVT 2106
Query: 302 --RILHPSSGRTLEVYSDQPGVQFYTSNSLPAPQESALVGKQGVGY 171
L S R L+V SD Q +N + PQ + + GY
Sbjct: 2107 VEPCLASSLERDLQVDSDLSNDQMLENNPIAVPQNDEYMYRAEEGY 2152
>08_01_0182 - 1534448-1534557,1534925-1535987
Length = 390
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -1
Query: 299 ILHPSSGRTLEVYSDQPGVQFYTSNSLPAPQESALVGKQGVGYRRHGAFCLETQNYPDAV 120
++H + G +++ Y+ GV ++L P S LV + +R A+C+ + A+
Sbjct: 13 LVHIAGGFSIQAYTRLRGVCAAWRDALRPPSPSLLVLRDRHAGQRFAAWCVSPRMVSTAL 72
Query: 119 HHT 111
H T
Sbjct: 73 HET 75
>07_03_1210 +
24903389-24903695,24904383-24904468,24904545-24904649,
24904737-24905531,24905719-24905941,24906318-24906712
Length = 636
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 68 VYILRQDTELLSGNSCDGQRPGNFGSRGRTRRDVCSQLPVYQPEQTL 208
+Y++ +D G DG PG F + R+RR+V L + P ++L
Sbjct: 56 LYVVSEDFREAQG--ADGGGPGVFARKWRSRREVVDWLASFLPAKSL 100
>10_07_0053 -
12406958-12407011,12407012-12407168,12407280-12407410,
12407592-12407727,12407953-12408224,12408604-12408893,
12408984-12409285,12409359-12409424,12409506-12409571,
12409855-12409926,12410013-12410084,12410207-12410281,
12410367-12410438,12410531-12410663,12411556-12411655
Length = 665
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -1
Query: 428 GGTPYDLRVPTKLGDVINKTGNGFDDNFCISTYTNKSLNFVSRILHPSSGRTLEVYSDQP 249
GG +P K + +N GN F N S T L +++ + G +V+S+ P
Sbjct: 111 GGQNIQYNLPNKKLERLNLAGNQFAGNVPYSISTMPKLKYLNLNHNQLQGNMTDVFSNLP 170
Query: 248 GVQ-FYTSNS 222
+ Y N+
Sbjct: 171 SLSTLYLQNN 180
>05_03_0471 -
14455543-14455650,14455925-14456002,14456121-14456285,
14457151-14457261,14457863-14458024,14458462-14458538,
14459526-14460177
Length = 450
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 427 PTLIKPPVGIDP--ESVSVILSAFITKIWL*ISW-TPVSWPAKLKY 555
P + PP I P ++ +I+ AF+TK L I W WP Y
Sbjct: 277 PLFMLPPKEIPPFWHAIFIIMLAFLTKCHLQIQWFARQQWPLSACY 322
>05_01_0509 - 4250217-4250240,4250617-4250711,4251050-4251365
Length = 144
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 474 RDLVSVYNKDMVVDLLDTSIVASQIKIRMVRQIYNGLLSCRRHKVDIQGIVVGNFISN 647
R+ + +D++VD+L V S + + V + + GL+S H+ + + G F S+
Sbjct: 17 RNPAAELTEDLIVDILSRLPVKSVCRCKCVSRRWRGLISDPDHRKKLPQTLAGFFYSS 74
>01_05_0387 -
21695277-21695351,21696186-21696228,21696325-21696454,
21696812-21697028,21697202-21697248,21698132-21698228,
21698637-21698687,21698788-21698919,21699345-21699499,
21700461-21700534,21700566-21700730,21701368-21701420
Length = 412
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 218 PAPQESALVGK--QGVGYRRHGAFCLETQNYPDAVH 117
P+ + ++G +GV RHGA C+ +PDAV+
Sbjct: 122 PSAAQKLVIGFDCEGVDLCRHGALCIMQIAFPDAVY 157
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,250,797
Number of Sequences: 37544
Number of extensions: 473303
Number of successful extensions: 1215
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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