Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_D02
         (797 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    50   3e-08
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    38   1e-04
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                28   0.087
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              27   0.27 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        26   0.35 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        26   0.35 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        26   0.35 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.62 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   3.3  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    23   3.3  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   4.3  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   7.6  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 50.0 bits (114), Expect = 3e-08
 Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = -1

Query: 674 VRLIDFGSAT-FDHEHHS-TIVSTRHYRAPEVILELGWSQPCDVWSIGCIMFELYLGITL 501
           V+L+DFG A   DH   + T   T  Y APEVIL  G     D WS+G +MFEL  G   
Sbjct: 505 VKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVILNKGHDISADYWSLGVLMFELLTGTPP 564

Query: 500 FQTHD 486
           F   D
Sbjct: 565 FTGGD 569


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = -1

Query: 692 RVKRSDVRLIDFGSATF---DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIMFE 522
           + K + V+L DFG A     + +       T  Y +PEV+ +  + +P D+W+ G I++ 
Sbjct: 45  KAKGAAVKLADFGLAIEVQGEAQAWFGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYI 104

Query: 521 LYLGITLFQTHDNREHLAMME 459
           L +G   F   D     A ++
Sbjct: 105 LLVGYPPFWDEDQHRLYAQIK 125



 Score = 31.9 bits (69), Expect = 0.007
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = -1

Query: 284 DLIARMLEYEPSQRVTLRDALKHPF 210
           +LI +ML   PS+R+T  +ALKHP+
Sbjct: 145 NLINQMLTVNPSKRITASEALKHPW 169


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 28.3 bits (60), Expect = 0.087
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -1

Query: 710 KTHDLRRVKRSDVRLIDFGSATFDHEHHST--IVSTRHYRAPEVILELGWSQPCDVWSIG 537
           K  ++   K    +L DFGS+      +       T  Y APEVI +   +   D++S+G
Sbjct: 182 KPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYTAPEVIKQNRPTPAADIYSLG 241

Query: 536 CIMFEL 519
            + +++
Sbjct: 242 IVAWQM 247


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 5   YYYKYKLRSTDSQQNIPIIRAY 70
           YY K+ L+  D + + P++RAY
Sbjct: 52  YYRKHLLKDADGRVSCPVLRAY 73


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 613 ETMVLWCSWSKVALPKSISLTSLRFTR 693
           + ++ WC+WS+  L K  +LT   ++R
Sbjct: 383 DKIIRWCTWSEGDLEKCKALTRAAYSR 409


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 613 ETMVLWCSWSKVALPKSISLTSLRFTR 693
           + ++ WC+WS+  L K  +LT   ++R
Sbjct: 383 DKIIRWCTWSEGDLEKCKALTRAAYSR 409


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 613 ETMVLWCSWSKVALPKSISLTSLRFTR 693
           + ++ WC+WS+  L K  +LT   ++R
Sbjct: 383 DKIIRWCTWSEGDLEKCKALTRAAYSR 409


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 602 YRAPEVILELGWSQPCDVWSIGCIMFEL 519
           + APE I    ++   DVWS+G + +E+
Sbjct: 804 WTAPEAIAFRKFTSASDVWSMGIVCWEV 831


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +2

Query: 38  SQQNIPIIRAYDKIFITYSSLLYVQSIHKTSSGPLTDSTSATARVH 175
           +Q+++  IRA  K+  T  +  +V+ +H T        T  T+  H
Sbjct: 219 AQKHVKSIRAVTKLPDTSMAKSFVRKVHATKPPKPQTKTKPTSPYH 264


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 17  YKLRSTDSQQNIPIIRAYDKIFITYSSLLYVQS 115
           +KL  TD+     I+ A+  +F  +S L+ V S
Sbjct: 45  FKLACTDTFMEGVIVLAFSGLFSVFSFLILVSS 77


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 554 DVWSIGCIMF 525
           DVW  GC+MF
Sbjct: 263 DVWMAGCMMF 272


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 423 PRHSVRYRSQDPLHHSE 473
           P+ +VR++  DP  HS+
Sbjct: 285 PKQTVRFKVHDPKAHSK 301


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,482
Number of Sequences: 438
Number of extensions: 4296
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)