Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_D01
         (829 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D83780-1|BAA12109.2| 1164|Homo sapiens KIAA0196 protein.               31   3.9  
BC106015-1|AAI06016.1| 1159|Homo sapiens KIAA0196 protein.             31   3.9  
BC026951-1|AAH26951.1| 1159|Homo sapiens KIAA0196 protein.             31   3.9  
AK223628-1|BAD97348.1| 1164|Homo sapiens Protein KIAA0196 varian...    31   3.9  

>D83780-1|BAA12109.2| 1164|Homo sapiens KIAA0196 protein.
          Length = 1164

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +1

Query: 7    YGRSNILKLLCSIVYKKLFNQILKLKPRPL-DKQVKTTIKSIVNYSTPLRVPVFN 168
            +G + + +LLC ++ K+L N +   +   L D+ V+ T+K+++N  +PL+  V N
Sbjct: 876  FGLNGLDRLLCFMIVKELQNFLSMFQKIILRDRTVQDTLKTLMNAVSPLKSIVAN 930


>BC106015-1|AAI06016.1| 1159|Homo sapiens KIAA0196 protein.
          Length = 1159

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +1

Query: 7    YGRSNILKLLCSIVYKKLFNQILKLKPRPL-DKQVKTTIKSIVNYSTPLRVPVFN 168
            +G + + +LLC ++ K+L N +   +   L D+ V+ T+K+++N  +PL+  V N
Sbjct: 871  FGLNGLDRLLCFMIVKELQNFLSMFQKIILRDRTVQDTLKTLMNAVSPLKSIVAN 925


>BC026951-1|AAH26951.1| 1159|Homo sapiens KIAA0196 protein.
          Length = 1159

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +1

Query: 7    YGRSNILKLLCSIVYKKLFNQILKLKPRPL-DKQVKTTIKSIVNYSTPLRVPVFN 168
            +G + + +LLC ++ K+L N +   +   L D+ V+ T+K+++N  +PL+  V N
Sbjct: 871  FGLNGLDRLLCFMIVKELQNFLSMFQKIILRDRTVQDTLKTLMNAVSPLKSIVAN 925


>AK223628-1|BAD97348.1| 1164|Homo sapiens Protein KIAA0196 variant
            protein.
          Length = 1164

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +1

Query: 7    YGRSNILKLLCSIVYKKLFNQILKLKPRPL-DKQVKTTIKSIVNYSTPLRVPVFN 168
            +G + + +LLC ++ K+L N +   +   L D+ V+ T+K+++N  +PL+  V N
Sbjct: 876  FGLNGLDRLLCFMIVKELQNFLSMFQKIILRDRTVQDTLKTLMNAVSPLKSIVAN 930


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,432,023
Number of Sequences: 237096
Number of extensions: 1898695
Number of successful extensions: 2784
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2784
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)