BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_C24
(765 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 363 e-102
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 363 e-102
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 363 e-102
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 331 2e-92
DQ974162-1|ABJ52802.1| 418|Anopheles gambiae serpin 3 protein. 27 0.84
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 363 bits (892), Expect = e-102
Identities = 173/174 (99%), Positives = 173/174 (99%)
Frame = -2
Query: 764 TTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 585
TTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 262
Query: 584 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 405
FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 404 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 243
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 363 bits (892), Expect = e-102
Identities = 173/174 (99%), Positives = 173/174 (99%)
Frame = -2
Query: 764 TTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 585
TTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 262
Query: 584 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 405
FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 404 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 243
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 363 bits (892), Expect = e-102
Identities = 173/174 (99%), Positives = 173/174 (99%)
Frame = -2
Query: 764 TTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 585
TTAEREIVRDIKEKL YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 262
Query: 584 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 405
FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 404 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 243
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 331 bits (813), Expect = 2e-92
Identities = 157/174 (90%), Positives = 163/174 (93%)
Frame = -2
Query: 764 TTAEREIVRDIKEKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 585
TTAEREIVRDIKEKL YVALDFEQEM AA+SSS EKSYELPDGQVITIGNERFR PEAL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMQAAAASSSSEKSYELPDGQVITIGNERFRAPEAL 262
Query: 584 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 405
FQPSFLGME+ GIHET YNSIM+CDVDIRKDLYAN+VLSGGTTMYPGIADRMQKEIT+LA
Sbjct: 263 FQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITSLA 322
Query: 404 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 243
PST+KIKIIAPPERKYSVWIGGSILASLSTFQ MWISK EYDE GP IVHRKCF
Sbjct: 323 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376
>DQ974162-1|ABJ52802.1| 418|Anopheles gambiae serpin 3 protein.
Length = 418
Score = 26.6 bits (56), Expect = 0.84
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 286 STTSLAPPLYTGSASKRTARRCLQQPAAGCSIQA 185
S +L LY GSAS+ R LQQ +G + QA
Sbjct: 70 SVKALLALLYEGSASRSETERELQQALSGGNSQA 103
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,077
Number of Sequences: 2352
Number of extensions: 17722
Number of successful extensions: 47
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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