Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_C21
         (761 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030270-1|AAH30270.1|  113|Homo sapiens chromosome 17 open read...   104   4e-22
AY462870-1|AAS58864.1|  452|Homo sapiens POTE8B protein.               36   0.21 
AY462869-1|AAS58863.1|  498|Homo sapiens POTE8A protein.               36   0.21 
CR545463-1|CAM28350.1|  545|Homo sapiens protein expressed in pr...    33   1.1  
AY466021-1|AAS58873.1|  288|Homo sapiens POTE22 protein.               33   1.1  
AY465171-1|AAS58870.1|  594|Homo sapiens POTE14B protein.              33   1.1  
AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    33   1.5  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    32   2.6  

>BC030270-1|AAH30270.1|  113|Homo sapiens chromosome 17 open reading
           frame 61 protein.
          Length = 113

 Score =  104 bits (249), Expect = 4e-22
 Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
 Frame = -1

Query: 635 LAQEAGPFVRLAGLSGAAAVILGAMGAHRT-FPETEAKDDLKKIFETANRFHFLHTLALV 459
           +A  A  F RL  LSGAAA+   + GAH   FP+   K+    +F+ AN+ HFLH+LAL+
Sbjct: 1   MAGPAAAFRRLGALSGAAALGFASYGAHGAQFPDAYGKE----LFDKANKHHFLHSLALL 56

Query: 458 TVPLCRRPYIAGAFFIAGMGMFCGTCYYHAFTGDRKLRQVTPLGGTCLILGWIAM 294
            VP CR+P  AG    +G  +FC + YY A +GD  ++ + P GGT L+LGW+A+
Sbjct: 57  GVPHCRKPLWAGLLLASGTTLFCTSFYYQALSGDPSIQTLAPAGGTLLLLGWLAL 111


>AY462870-1|AAS58864.1|  452|Homo sapiens POTE8B protein.
          Length = 452

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 642 VATCPRGRSFC*AGRT-KWCCCCNPWCYGSTSN 547
           +A  P  + F   G+  KWCCCC P C GS  N
Sbjct: 9   LAASPMKKPFGFRGKMGKWCCCCFPCCRGSGKN 41


>AY462869-1|AAS58863.1|  498|Homo sapiens POTE8A protein.
          Length = 498

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 642 VATCPRGRSFC*AGRT-KWCCCCNPWCYGSTSN 547
           +A  P  + F   G+  KWCCCC P C GS  N
Sbjct: 9   LAASPMKKPFGFRGKMGKWCCCCFPCCRGSGKN 41


>CR545463-1|CAM28350.1|  545|Homo sapiens protein expressed in
           prostate, ovary, testis, and8) pseudogene protein.
          Length = 545

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -3

Query: 594 KWCCCCNPWCYGS 556
           KWCC C PWC GS
Sbjct: 63  KWCCHCFPWCRGS 75


>AY466021-1|AAS58873.1|  288|Homo sapiens POTE22 protein.
          Length = 288

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -3

Query: 594 KWCCCCNPWCYGS 556
           KWCC C PWC GS
Sbjct: 63  KWCCHCFPWCRGS 75


>AY465171-1|AAS58870.1|  594|Homo sapiens POTE14B protein.
          Length = 594

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -3

Query: 594 KWCCCCNPWCYGS 556
           KWCC C PWC GS
Sbjct: 63  KWCCHCFPWCRGS 75


>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 172 IYCDILSFNLIHIRL*LYFYCLNYNVVKINTCIFICS 62
           IY  + ++  IHI    Y Y  +Y  + I+ C+FIC+
Sbjct: 73  IYTHMHTYMYIHIHAYAYIYVYSYTRICIHICVFICT 109


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 172 IYCDILSFNLIHIRL*LYFYCLNYNVVKINTCIFICS 62
           IY  + ++  IH+    Y Y  +Y  + I+ CIFIC+
Sbjct: 93  IYTHMHTYMYIHMHAYAYIYVYSYTRICIHICIFICT 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,174,554
Number of Sequences: 237096
Number of extensions: 1910768
Number of successful extensions: 2931
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2928
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)