Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_C20
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical pr...   191   4e-49
Z46934-7|CAA87047.1|  472|Caenorhabditis elegans Hypothetical pr...   174   7e-44
AL032632-12|CAA21589.3|  333|Caenorhabditis elegans Hypothetical...    76   4e-14
AL132865-10|CAB60607.2|  279|Caenorhabditis elegans Hypothetical...    31   1.3  
AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical...    29   3.0  
AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical ...    29   5.3  

>U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical
           protein C44B7.10 protein.
          Length = 471

 Score =  191 bits (466), Expect = 4e-49
 Identities = 91/128 (71%), Positives = 107/128 (83%)
 Frame = -3

Query: 816 AIXSCIEVDLTGQICADSIGTRMYSGFGGQVDFIRGAAEAVDGKGKPIIALVSNTKKGES 637
           AI S +E+DLTGQ+ +DS+G R  SGFGGQVDFIRGAA   DG GKPIIAL S +KKG+S
Sbjct: 342 AINSAVEIDLTGQVVSDSVGKRFLSGFGGQVDFIRGAAIGNDGLGKPIIALPSISKKGQS 401

Query: 636 KIVPTLKVGAGVVTTRAHVHYVVTEQGIAYLFGXTLRQRAYELIKIAHPDHREALEKAAF 457
           KIVPT+  GAGVVT+RAHVHYVVTE GIA L+G  +RQRAYELIKI+HP  RE+L+KAAF
Sbjct: 402 KIVPTINEGAGVVTSRAHVHYVVTEYGIAQLWGKNMRQRAYELIKISHPSQRESLDKAAF 461

Query: 456 ERLKCMPA 433
           +RLK MP+
Sbjct: 462 DRLKVMPS 469


>Z46934-7|CAA87047.1|  472|Caenorhabditis elegans Hypothetical
           protein ZK1320.9 protein.
          Length = 472

 Score =  174 bits (423), Expect = 7e-44
 Identities = 83/128 (64%), Positives = 100/128 (78%)
 Frame = -3

Query: 816 AIXSCIEVDLTGQICADSIGTRMYSGFGGQVDFIRGAAEAVDGKGKPIIALVSNTKKGES 637
           +I S IE+DLTGQI +DSIG   +SGFGGQVDF+  +    DG GK IIAL S T KG++
Sbjct: 344 SINSAIEIDLTGQIVSDSIGRNFFSGFGGQVDFMAASPHGFDGLGKAIIALPSRTTKGQT 403

Query: 636 KIVPTLKVGAGVVTTRAHVHYVVTEQGIAYLFGXTLRQRAYELIKIAHPDHREALEKAAF 457
           KIVP L  G+GVVTTRAH  Y+VTE GIA L+G ++RQRAYELI+I+HPD REALEKAAF
Sbjct: 404 KIVPFLTQGSGVVTTRAHARYIVTEHGIANLWGKSIRQRAYELIQISHPDDREALEKAAF 463

Query: 456 ERLKCMPA 433
           +R K MP+
Sbjct: 464 DRFKVMPS 471


>AL032632-12|CAA21589.3|  333|Caenorhabditis elegans Hypothetical
           protein Y11D7A.1 protein.
          Length = 333

 Score = 75.8 bits (178), Expect = 4e-14
 Identities = 36/56 (64%), Positives = 44/56 (78%)
 Frame = -3

Query: 693 DGKGKPIIALVSNTKKGESKIVPTLKVGAGVVTTRAHVHYVVTEQGIAYLFGXTLR 526
           DG GK IIAL S T KG++KIVP L  G+GVVTTRAH  Y+VTE GIA+L+G ++R
Sbjct: 278 DGLGKAIIALPSRTTKGQTKIVPFLAQGSGVVTTRAHAIYIVTEHGIAHLWGKSIR 333



 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = -3

Query: 816 AIXSCIEVDLTGQICADSIGTRMYSGFGGQVDFI 715
           +I S IE+DLTGQI +DSIG   +SGFGG+VDF+
Sbjct: 189 SINSAIEIDLTGQIVSDSIGRNFFSGFGGRVDFM 222


>AL132865-10|CAB60607.2|  279|Caenorhabditis elegans Hypothetical
           protein Y62E10A.13b protein.
          Length = 279

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 647 FLVLETRAMMGLPLPSTASAAPRMKSTCP 733
           +L L T  M+ + LP+TASA PR  ST P
Sbjct: 9   YLFLATLIMIRVALPTTASAIPRSISTSP 37


>AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical
           protein Y51H7C.1 protein.
          Length = 448

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 683 PLPSTASAAPRMKSTCPPKPEYMRVPIESAHICPVRSTSMQEXIA 817
           P+P+T +  P+  +T PP PE    P  S   C +    +Q  ++
Sbjct: 253 PIPTTKTTVPQQWTTLPPGPEPTPGPGPSGECCYIDLRRIQATVS 297


>AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical
           protein Y73B3A.1 protein.
          Length = 659

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 22/63 (34%), Positives = 29/63 (46%)
 Frame = -1

Query: 818 PRSTPASRWTSPDRYAPTLSVPACTPVSVGRLTSSAALRRLWTVKANPS*LSSPTPRRAR 639
           PR++PA+  T+    AP  S+PA  P       S  A RR  +    PS  S  TP    
Sbjct: 343 PRNSPAANATAAREDAPEASIPAPAP-------SPPASRRSVSRTTQPSTSSFATPTEPP 395

Query: 638 AKS 630
           AK+
Sbjct: 396 AKN 398


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,122,681
Number of Sequences: 27780
Number of extensions: 304038
Number of successful extensions: 786
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)