Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_C18
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.79 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   7.4  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.8  

>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
 Frame = -1

Query: 548 GPAHGDELAYIF-EPLDTEGKSMSGAVSDSDAKVRDNFVDLISKFAHSLNGEENNTKTNL 372
           G  HGDE+ Y+F  PL+   KS+  +  + D  +R   +   S+FA+     + +++   
Sbjct: 493 GVLHGDEVEYVFGHPLN---KSLKYSDKERDLSLR--MILYFSEFAYLGKPTKEDSE--- 544

Query: 371 MGLQPYSEENDQFLKINDGIKT--DKGFRFCQMGLWGGMADRLTG 243
                YS +  ++  I D  KT   KG R      W     +L G
Sbjct: 545 --WPSYSRDEPKYF-IFDAEKTGLGKGPRTTYCAFWNEFLPKLKG 586


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 384 CIVLFSIKAVREFGNEIYKVVPNFSITVGYCTTH*F 491
           CIV  S   VR  GN +  ++P+    VG   TH F
Sbjct: 215 CIVFGSDMIVRSIGNSLMVILPDL---VGKKITHFF 247


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 404  NGEENNTKTNLMGLQPYSE 348
            +GEE   +  L GL+PY++
Sbjct: 1064 DGEEGGAELRLTGLRPYTK 1082


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 404  NGEENNTKTNLMGLQPYSE 348
            +GEE   +  L GL+PY++
Sbjct: 1060 DGEEGGAELRLTGLRPYTK 1078


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 565 YTFISFELSVRASPGRKY 618
           Y F+ F    R+  GRKY
Sbjct: 476 YAFVPFSAGPRSCVGRKY 493


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 703 RTRVFASGAQGVPLIYIA 650
           R+   AS A G PL Y+A
Sbjct: 132 RSSALASKATGYPLAYVA 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,659
Number of Sequences: 438
Number of extensions: 5244
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)