Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_C16
         (709 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003141-9|AAM48550.1|   89|Caenorhabditis elegans Hypothetical ...    62   4e-10
U28412-9|AAK71403.2|  251|Caenorhabditis elegans Hypothetical pr...    33   0.15 
Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical pr...    32   0.35 
Z66513-12|CAI46602.1|  492|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z66513-11|CAA91332.3|  427|Caenorhabditis elegans Hypothetical p...    29   3.3  
AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical ...    29   3.3  
U23521-9|AAC46809.2|  499|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z74030-18|CAA98448.1|  494|Caenorhabditis elegans Hypothetical p...    28   5.7  
Z73970-6|CAA98247.1|  494|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>AF003141-9|AAM48550.1|   89|Caenorhabditis elegans Hypothetical
           protein W02D3.12 protein.
          Length = 89

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -2

Query: 345 GEVGGPKGPEPTRYGDWERKGRVSDF 268
           GEVGGP GPEPTRYGDWERKGRVSDF
Sbjct: 64  GEVGGPAGPEPTRYGDWERKGRVSDF 89


>U28412-9|AAK71403.2|  251|Caenorhabditis elegans Hypothetical
           protein T19C3.7 protein.
          Length = 251

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -2

Query: 558 NNARICLSHYYSQQPPIEKENESVKKPESKRLSEFRKKLRETTSITDLGEQT 403
           NN RI ++   + Q  IE EN  V+    K L E R+K RE  ++    E+T
Sbjct: 87  NNGRIDVAELPAGQRVIEVENNEVRDKYKKTLYEIRRKCRELQNLGAEDEET 138


>Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical
           protein ZK856.1 protein.
          Length = 765

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = -3

Query: 512 RSKKKMKV*KNLSQNDYLSLEKN*EKLHQSLILVNKLQIPRKMLCLLGPTILTPTLVKLV 333
           +S+++ KV  NL     LSLE N EK H+S++ + +L++   ++ +L  T  T TL +L 
Sbjct: 664 KSQQRGKV--NLIGRLQLSLEANAEKEHESIVALRELRVQEGIVKIL-KTRKTYTLAQLT 720

Query: 332 -----VPKGLNQPDMVIGKEKEEYLI 270
                + K L  P+  I KE+ ++LI
Sbjct: 721 MELVEILKPLFIPNRKIIKEQIDWLI 746


>Z66513-12|CAI46602.1|  492|Caenorhabditis elegans Hypothetical
           protein F54D5.5b protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = -2

Query: 588 RKLRNKALKLNNARICLSHYYSQQPPIEKENESVKKPESK 469
           RKL++   + N+A+  + HY +Q   ++KE +  +K  S+
Sbjct: 274 RKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCYRKELSR 313


>Z66513-11|CAA91332.3|  427|Caenorhabditis elegans Hypothetical
           protein F54D5.5a protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = -2

Query: 588 RKLRNKALKLNNARICLSHYYSQQPPIEKENESVKKPESK 469
           RKL++   + N+A+  + HY +Q   ++KE +  +K  S+
Sbjct: 209 RKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCYRKELSR 248


>AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical
           protein Y50D7A.1 protein.
          Length = 791

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -2

Query: 681 LIVYDRXHRLYT*ILSPNFVSNTNIMLWNAIRKLRNKALKLNNARI 544
           L ++ R  R++T   +PN + N+   L   I K    ALK +N +I
Sbjct: 627 LKIFFRISRIFTFFYNPNVLGNSRKFLKKEIIKFGKNALKTSNIQI 672


>U23521-9|AAC46809.2|  499|Caenorhabditis elegans Hypothetical
           protein F41C3.2 protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 104 FSTGYFCTIQYFLLYYTMKERNGTKVNLTFITMLSFCVT 220
           FS  Y   +   ++ Y +  R+G K      +MLSF  T
Sbjct: 98  FSAAYIAPLPSIIILYFLTNRSGVKTTFLICSMLSFLST 136


>Z74030-18|CAA98448.1|  494|Caenorhabditis elegans Hypothetical
           protein D1054.15 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -2

Query: 588 RKLRNKALK-LNNARICLSHYYSQQPPIEKENESVKKPESKRLSEFRKKLRE 436
           + L N+  K L  A+    H Y+Q PP+ +EN+S+ +   KR  E+   +++
Sbjct: 30  KALLNQVFKSLKRAQDLFYHDYAQPPPMPEENDSLIR-SMKRKHEYGNVIKK 80


>Z73970-6|CAA98247.1|  494|Caenorhabditis elegans Hypothetical
           protein D1054.15 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -2

Query: 588 RKLRNKALK-LNNARICLSHYYSQQPPIEKENESVKKPESKRLSEFRKKLRE 436
           + L N+  K L  A+    H Y+Q PP+ +EN+S+ +   KR  E+   +++
Sbjct: 30  KALLNQVFKSLKRAQDLFYHDYAQPPPMPEENDSLIR-SMKRKHEYGNVIKK 80


>Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical
           protein T13H10.2 protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 633 PNFVSNTNIMLWNAIRKLRNKALKLN 556
           P FV N+ I +W++I K + ++L +N
Sbjct: 123 PGFVDNSQISIWSSIEKEKPQSLTVN 148


>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
           protein T20G5.5 protein.
          Length = 1234

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 243 RTKHNFEFRNQILFLFFPNHHIWLV 317
           R  + F FR+  LFL  P+H  WL+
Sbjct: 126 RVVYVFMFRSLFLFLLHPSHQKWLL 150


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -2

Query: 522  QQPPIEKENESVKKPESKRLSEFRKKLRETTS-ITDLGEQTSNSKEDAL 379
            Q+P  E ++  V++  ++   E+RKK ++TT+ +T + +   + K + L
Sbjct: 1745 QRPEFECKDAKVERMNAQEYEEYRKKCKKTTTKVTKVIDSCDDVKVEEL 1793


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,507,933
Number of Sequences: 27780
Number of extensions: 287929
Number of successful extensions: 896
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)