Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_C09
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0927 - 22642670-22643023                                         35   0.100
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     29   3.8  
06_03_0138 + 17093196-17093325,17095704-17095804,17096224-170962...    29   5.0  
11_01_0297 - 2229109-2229279,2229515-2229904                           29   6.6  
03_02_0630 + 9964593-9964738,9965548-9965603,9965895-9966745,996...    29   6.6  
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818...    28   8.7  
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023...    28   8.7  

>07_03_0927 - 22642670-22643023
          Length = 117

 Score = 34.7 bits (76), Expect = 0.100
 Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = -1

Query: 766 HEGAT-IPGKLVPSHGCAYVP-WGGIEHGKPQY---QILVGGPNNWVPTSGSNVPPGAFP 602
           HEG   IPG      G  YVP   G++H  P     Q L G  + WVP  G  VP    P
Sbjct: 53  HEGTVLIPGLGRFELGSTYVPDITGVDHSVPAAEHGQFLPGADDTWVPNPGFEVPNPFQP 112

Query: 601 GGET 590
           G  +
Sbjct: 113 GSSS 116


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +3

Query: 546 PSWRTRPMYKGSPSSVSPPGNAPGGTLDPLVGTQLFGPPTKIWY*GFPCSIPPHGT*AQP 725
           P + + P      S  +PP  APG    P  G Q + PP        P  IPP GT A  
Sbjct: 440 PPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQ-YAPP--------PAPIPPPGT-APS 489

Query: 726 *EGTS--LPGIVAPS 764
            +G     PG+  PS
Sbjct: 490 TDGAQNYPPGVTPPS 504


>06_03_0138 +
           17093196-17093325,17095704-17095804,17096224-17096292,
           17096403-17097650,17097763-17097871,17099459-17099655,
           17099732-17099842,17099927-17100079
          Length = 705

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +3

Query: 531 PVVRLPSWRTRPMYKGSPSSVSPPGNAPGGTLDPLVGTQLFGPPTKIWY*GFPCSI-PPH 707
           P   LPSW + PM    PSS     N  G T+ P+     + PP+   +   P  + PPH
Sbjct: 189 PGASLPSWNSSPM----PSS----ANGAGLTMPPMYWPGFYTPPSGFPHLQQPPFLRPPH 240

Query: 708 G 710
           G
Sbjct: 241 G 241


>11_01_0297 - 2229109-2229279,2229515-2229904
          Length = 186

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +1

Query: 658 HLLRSGIEAFHVQYHPMERKRSHE--KERVYQGSW 756
           HLLR  +  FH     M R   HE  K   Y GSW
Sbjct: 10  HLLRPLLRGFHATSQAMARPEPHEFSKPSDYLGSW 44


>03_02_0630 +
           9964593-9964738,9965548-9965603,9965895-9966745,
           9966848-9967046,9967246-9967425,9967591-9967967,
           9968625-9968765
          Length = 649

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 582 ENLYTLAVSATKVASPPARFNSLTASA 502
           EN+ T+  SA+K+A+PPA   S  A++
Sbjct: 231 ENIDTITDSASKIATPPATITSFGAAS 257


>03_05_0524 -
           25181432-25181483,25181565-25181691,25181776-25181826,
           25182159-25182314,25182405-25182905,25182999-25183713,
           25183797-25183867,25183974-25184103,25185706-25186167
          Length = 754

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = -1

Query: 640 PTSGSNVPPGA--FPGGETEDGEPLYIGRVRHEGSLTTGKVQ 521
           P  G   PPG   +PG   + G+P  +    H+G+   G  Q
Sbjct: 8   PGRGGGAPPGMTPWPGPPPQPGQPAVVYTALHQGAYQPGVAQ 49


>02_05_0938 +
           32901143-32901215,32901841-32901982,32902243-32902314,
           32902573-32902644,32902711-32902782,32902913-32902948,
           32903001-32903072,32903319-32903387,32903483-32903554,
           32903668-32903739,32903838-32903909,32904153-32904224,
           32904470-32904541,32904623-32904694,32904782-32904853,
           32904911-32905003,32905150-32905218,32905315-32905386,
           32905479-32905552,32905643-32905771,32905966-32906331,
           32906584-32906954,32907522-32907890
          Length = 884

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 603 PVEKLKMENLYTLAVSATKVASP-PARFNSL 514
           P+E  KM+NL TL +S   VA P P+   SL
Sbjct: 311 PIELAKMKNLDTLDLSCNMVAGPIPSAIGSL 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,539,546
Number of Sequences: 37544
Number of extensions: 584798
Number of successful extensions: 1545
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)