Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_C04
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12685-1|AAA57006.1| 323|Homo sapiens cyclin H protein. 30 6.5
U11791-1|AAA21361.1| 323|Homo sapiens cyclin H protein. 30 6.5
CR407658-1|CAG28586.1| 323|Homo sapiens CCNH protein. 30 6.5
BC022351-1|AAH22351.1| 323|Homo sapiens cyclin H protein. 30 6.5
BC016823-1|AAH16823.1| 323|Homo sapiens cyclin H protein. 30 6.5
BC016705-1|AAH16705.1| 323|Homo sapiens cyclin H protein. 30 6.5
BC005280-1|AAH05280.1| 323|Homo sapiens cyclin H protein. 30 6.5
AF477979-1|AAL74271.1| 323|Homo sapiens cyclin H protein. 30 6.5
AB209342-1|BAD92579.1| 272|Homo sapiens cyclin H variant protein. 30 6.5
>U12685-1|AAA57006.1| 323|Homo sapiens cyclin H protein.
Length = 323
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 331 CLYFFDFFLVRLIR--HPRMISFELAYLVC-IDPFLKSGIQHPQRDQQ*QENEVGEHE 495
C+YF F+L + HPR+I A+L C +D F + PQ +E+ +G+ +
Sbjct: 84 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEK 138
>U11791-1|AAA21361.1| 323|Homo sapiens cyclin H protein.
Length = 323
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 331 CLYFFDFFLVRLIR--HPRMISFELAYLVC-IDPFLKSGIQHPQRDQQ*QENEVGEHE 495
C+YF F+L + HPR+I A+L C +D F + PQ +E+ +G+ +
Sbjct: 84 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEK 138
>CR407658-1|CAG28586.1| 323|Homo sapiens CCNH protein.
Length = 323
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 331 CLYFFDFFLVRLIR--HPRMISFELAYLVC-IDPFLKSGIQHPQRDQQ*QENEVGEHE 495
C+YF F+L + HPR+I A+L C +D F + PQ +E+ +G+ +
Sbjct: 84 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEK 138
>BC022351-1|AAH22351.1| 323|Homo sapiens cyclin H protein.
Length = 323
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 331 CLYFFDFFLVRLIR--HPRMISFELAYLVC-IDPFLKSGIQHPQRDQQ*QENEVGEHE 495
C+YF F+L + HPR+I A+L C +D F + PQ +E+ +G+ +
Sbjct: 84 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEK 138
>BC016823-1|AAH16823.1| 323|Homo sapiens cyclin H protein.
Length = 323
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 331 CLYFFDFFLVRLIR--HPRMISFELAYLVC-IDPFLKSGIQHPQRDQQ*QENEVGEHE 495
C+YF F+L + HPR+I A+L C +D F + PQ +E+ +G+ +
Sbjct: 84 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEK 138
>BC016705-1|AAH16705.1| 323|Homo sapiens cyclin H protein.
Length = 323
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 331 CLYFFDFFLVRLIR--HPRMISFELAYLVC-IDPFLKSGIQHPQRDQQ*QENEVGEHE 495
C+YF F+L + HPR+I A+L C +D F + PQ +E+ +G+ +
Sbjct: 84 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEK 138
>BC005280-1|AAH05280.1| 323|Homo sapiens cyclin H protein.
Length = 323
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 331 CLYFFDFFLVRLIR--HPRMISFELAYLVC-IDPFLKSGIQHPQRDQQ*QENEVGEHE 495
C+YF F+L + HPR+I A+L C +D F + PQ +E+ +G+ +
Sbjct: 84 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEK 138
>AF477979-1|AAL74271.1| 323|Homo sapiens cyclin H protein.
Length = 323
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 331 CLYFFDFFLVRLIR--HPRMISFELAYLVC-IDPFLKSGIQHPQRDQQ*QENEVGEHE 495
C+YF F+L + HPR+I A+L C +D F + PQ +E+ +G+ +
Sbjct: 84 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEK 138
>AB209342-1|BAD92579.1| 272|Homo sapiens cyclin H variant protein.
Length = 272
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 331 CLYFFDFFLVRLIR--HPRMISFELAYLVC-IDPFLKSGIQHPQRDQQ*QENEVGEHE 495
C+YF F+L + HPR+I A+L C +D F + PQ +E+ +G+ +
Sbjct: 27 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEK 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,766,519
Number of Sequences: 237096
Number of extensions: 1475409
Number of successful extensions: 2958
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2958
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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