Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_C01
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.23 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.7  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 107 IIYLRYQKLLYGCIIKNNFLSNHHTFEHTKIIDLL*LEALKKYIV 241
           II L    +LY CII  N +SN  T    K ID + L A K+ ++
Sbjct: 247 IIPLIILLILY-CIIAKNLMSNAATLVLNKHIDNISLRARKQVVL 290


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 526  LNYLLNKGADPNVV 485
            LNY + KGADP  +
Sbjct: 2546 LNYWIEKGADPGKI 2559


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 208 IIIRSFKKIYC*IFV*IYTLA*QSKFISEMIKV 306
           I+IRSFK  Y  +   + T   QSK + E++ +
Sbjct: 191 ILIRSFKSRYKDLNQKLETACEQSKSVEELMNI 223


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 499 DPNVVDKHGISVLLAAIWEGHTDC 428
           DP+ V  HG  V+ + +   + DC
Sbjct: 444 DPSSVLSHGHRVIYSTVGHWYLDC 467


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 411 LSNVLTQSVWPSHIAANRTDIPC 479
           L NVLT  +W + +A    ++ C
Sbjct: 75  LINVLTDIIWKTTVAWYAGNVAC 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,316
Number of Sequences: 336
Number of extensions: 3130
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)