Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_C01
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 49 5e-07
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 48 2e-06
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 47 2e-06
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 35 0.009
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 32 0.062
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 30 0.25
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 29 0.43
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 29 0.43
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 29 0.43
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 29 0.57
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 29 0.76
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 4.0
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 25 9.3
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 25 9.3
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 49.2 bits (112), Expect = 5e-07
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 640 GDIDQVKDIIENKKIDVNASID-GRVPLHYAADYGQTTVLNYLLNKGADPNVVDKHGISV 464
G++D VK++I ++KIDVNA+ + G LH+AA Q + +LL GAD N + G +
Sbjct: 11 GELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNAI---GGDL 67
Query: 463 LLAAI-WEGHTDCVKT---LLKNGASKNGKTPDGTPYLEAA 353
A I W VKT L+++GA K G L A
Sbjct: 68 QAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLA 108
Score = 39.1 bits (87), Expect = 5e-04
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = -3
Query: 595 DVNASIDGRV---PLHYAADYGQTTVLNYLLNKGADPNVVDKHGISVLLAAI 449
DVNA I G + P+H+AA G ++YL+ GADP + DK G + L A+
Sbjct: 59 DVNA-IGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAV 109
Score = 35.9 bits (79), Expect = 0.005
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -3
Query: 565 PLHYAADYGQTTVLNYLLNKGADPNVVDKHGISVLLAAIWEGHTDCVKTLLKNG 404
PL +A+ +G + N LL GAD D+ ++ L +I G+ C+K +LK G
Sbjct: 137 PLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLHWSIVGGNLKCMKLILKEG 190
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 47.6 bits (108), Expect = 2e-06
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = -3
Query: 580 IDGRVPLHYAADYGQTTVLNYLLNKGADPNVVDKHGISVLLAAIWEGHTDCVKTLLKNGA 401
+ G+ PLH AA G+ V+ YL+++ A N D +G + L A+ EGH D L++ GA
Sbjct: 139 LQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGA 198
Query: 400 SKNGKTPDGTPYLE 359
K + LE
Sbjct: 199 DTLRKDSENHTALE 212
Score = 31.9 bits (69), Expect = 0.081
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 631 DQVKDIIENKKIDVNA-SIDGRVPLHYAADYGQTTVLNYLLNK-GADPNVVDKHGISVLL 458
+ V+ I+N +NA D R PLH+A G+ + +LL + P+ D+ G + L+
Sbjct: 17 EYVEQAIQNDPNSLNAVDDDKRTPLHWACSVGKVNTIYFLLKQPNIKPDEKDEAGWTPLM 76
Query: 457 AAI 449
+I
Sbjct: 77 ISI 79
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 47.2 bits (107), Expect = 2e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = -3
Query: 553 AADYGQTTVLNYLLNKGADPNVVDKHGISVLLAAIWEGHTDCVKTLLKNGASKNGKTPDG 374
AA G+T V+ L+ G PN D++G + + AA+ GH+D +K L++ G N + DG
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDG 70
Query: 373 TPYLEAAEK 347
L EK
Sbjct: 71 ETPLFVCEK 79
Score = 34.7 bits (76), Expect = 0.012
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 586 ASIDGRVPLHYAADYGQTTVLNYLLNKGADPNVVDKHG 473
A +G P+H A YG + +L L+ +G D N+ D+ G
Sbjct: 33 ADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDG 70
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 35.1 bits (77), Expect = 0.009
Identities = 22/58 (37%), Positives = 25/58 (43%)
Frame = -3
Query: 574 GRVPLHYAADYGQTTVLNYLLNKGADPNVVDKHGISVLLAAIWEGHTDCVKTLLKNGA 401
GR LH A G + +L N G D N D G + L A H D LL NGA
Sbjct: 862 GRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNGA 919
Score = 31.9 bits (69), Expect = 0.081
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 607 NKKIDVNA-SIDGRVPLHYAADYGQTTVLNYLLNKGADPNVVDKHG 473
N DVN G PLHYA+ Y + LL+ GA P+V+ G
Sbjct: 883 NAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIGASG 928
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 32.3 bits (70), Expect = 0.062
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 529 VLNYLLNKGADPNVVDKHGISVLLAAIWEGHTDCVKTLLKNGASKNGK 386
++ L+ G +PN VD + L A+ +CVK LLK GA+ + +
Sbjct: 349 IVEELILAGFNPNEVDASSNTALHTAVRYNRPECVKMLLKLGANPSAR 396
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 30.3 bits (65), Expect = 0.25
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 595 DVNASID--GRVPLHYAADYGQTTVLNYLLNKGAD 497
DVNA ID G LH+AA G +++ LL GA+
Sbjct: 228 DVNAGIDEDGHTALHWAAAMGNLEMMHALLQAGAN 262
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 29.5 bits (63), Expect = 0.43
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 589 NASIDGRVPLHYAADYGQTTVLNYLLNKGADPNVVDKHG 473
N + PLHYA ++ LL GADP +++ +G
Sbjct: 428 NVHLHTSTPLHYAVTQKNAKLVAKLLRNGADPAMLNGNG 466
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 29.5 bits (63), Expect = 0.43
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -3
Query: 640 GDIDQVKDIIE--NKKIDVNASID-GRVPLHYAADYGQTTVLNYLLNKGADPNV 488
G I V+ II NK++ +NA + G +H+AA G + LL G DP++
Sbjct: 47 GHIAVVQKIIPYLNKEV-INAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHI 99
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 29.5 bits (63), Expect = 0.43
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = -3
Query: 598 IDVNASID--GRVPLHYAADYGQTTVLNYLLNKGADPNVVDKHGISVLLAAI 449
+D++ ID G LH+AA + +L L++KGA+P + G + L+ ++
Sbjct: 347 LDLDVPIDELGHAALHWAAAVAKMPLLQALIHKGANPLRGNLTGETALMRSV 398
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 29.1 bits (62), Expect = 0.57
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 541 GQTTVLNYLLNKGADP-NVVDKHGISVLLAAIWEGHTDCVKTLLKNGASKNGKTPDGTPY 365
G V+ L+ P N VD+ S L+ A GH VK LL+NGA T G
Sbjct: 63 GDLEVVKSLVENYNTPINQVDQFDYSPLVLASLCGHEPVVKFLLENGALCERDTFQGERC 122
Query: 364 LEAAEKD 344
L A D
Sbjct: 123 LYGALND 129
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 640 GDIDQVKDIIENKKIDVNASID--GRVPLHYAADYGQTTVLNYLLNKGA 500
GD++ VK ++EN +N +D PL A+ G V+ +LL GA
Sbjct: 63 GDLEVVKSLVENYNTPIN-QVDQFDYSPLVLASLCGHEPVVKFLLENGA 110
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 28.7 bits (61), Expect = 0.76
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 577 DGRVPLHYAADYGQTTVLNYLLNKGADPNVVDKHGISVLL-AAIWEGHTDC 428
DG LH+A G ++ LL AD V ++ + L+ + I+ + DC
Sbjct: 247 DGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPLMRSVIFTNNYDC 297
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 258 DSYKNSTIYFFKASNYNKSIIFVCSKV*WFERKLFLIMHP*SSF 127
D KN + S+YNK + K+ W ER+ +++ S+
Sbjct: 939 DELKNRNLLMDDISSYNKQTTKLQEKIKWLERERSILIDELESY 982
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 25.0 bits (52), Expect = 9.3
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +1
Query: 457 LIELIFHVYQ----QHLDQ-PLCSVNSSRQLFVHSLLHSVMELFH 576
LIE ++ Y + LD+ PLCS +LF+ L S++E FH
Sbjct: 7 LIEAFYNTYPLEKAKELDKSPLCS---EYELFIKELWPSIVESFH 48
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 125 QKLLYGCIIKNNFLSNHHTFEHTKIIDLL*LEALKKYIVEFLYESIP 265
+KLL+ I + +S +E+ + ++ L L IV++LY+ P
Sbjct: 1097 KKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYP 1143
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,494,006
Number of Sequences: 5004
Number of extensions: 49953
Number of successful extensions: 133
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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