Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_B24
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471,970... 39 0.004
02_01_0166 + 1154695-1156569 36 0.039
03_02_0773 + 11063556-11064077 32 0.49
07_03_1244 + 25139159-25139252,25139839-25139924,25140103-251401... 31 0.64
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 31 0.64
08_02_0202 - 14202996-14203241,14203630-14203823,14203947-142045... 31 1.1
06_03_1207 + 28418473-28421073 30 1.5
04_04_1686 + 35362454-35362781,35362891-35363165,35363770-35363880 29 2.6
04_01_0310 + 4197835-4197875,4197994-4198924 29 2.6
04_04_0537 + 26079926-26079994,26080317-26080500,26081866-260839... 29 3.4
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 29 3.4
08_02_0785 + 21190002-21190253,21190452-21190523,21191498-211916... 29 4.5
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 29 4.5
03_02_0879 + 12097602-12098120,12099215-12099254,12099550-120996... 29 4.5
04_03_0078 - 10740091-10740154,10740378-10740469,10740624-107408... 28 6.0
05_03_0064 + 7946548-7946961 28 7.9
04_03_0199 - 12559351-12559433,12559693-12559827,12560260-125604... 28 7.9
>01_01_1206 -
9702128-9702184,9702272-9702323,9702410-9702471,
9702578-9702665,9703027-9703095,9703224-9703281,
9703895-9703996,9704075-9704179,9704273-9704624,
9706005-9706100,9706427-9706501,9707192-9707370,
9707501-9707740,9707922-9708017,9708193-9708306,
9708428-9708527
Length = 614
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 588 HEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDXEQNYAMSSVNSEN----VDDDYE 421
H+M + +T +SDVP+S E D H + ED Y + E+ VDD E
Sbjct: 343 HDMPEHSEETHEDESDVPESAE--DSYAGYHSEVEDDRHKYDDEDFSHESDDEYVDDHDE 400
Query: 420 HAYAYIVDDDLKXRLRKQFRA 358
H +Y DDD K F A
Sbjct: 401 HVASYKSDDDQKGDDHSDFTA 421
>02_01_0166 + 1154695-1156569
Length = 624
Score = 35.5 bits (78), Expect = 0.039
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -3
Query: 582 MLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDXEQNYA--MSSVNSENVDDDYEHAYA 409
ML +L RS+ DVP +F+T + GHC D E+ YA +S + + V DD E A
Sbjct: 361 MLFGQLLDRRSKVDVP-AFKTLIL---GHCREGDFEEGYALLLSMLKRDLVPDD-ECYIA 415
Query: 408 YIVDDDLKXRLRKQFRAISTMSLQGLPP 325
I + R++ + A+ M GL P
Sbjct: 416 VIEGFSQRGRMKFAWEALHRMLNSGLRP 443
>03_02_0773 + 11063556-11064077
Length = 173
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 543 DVPQSFETKDIERNGHCDSEDXEQNYAMSSVNSENVDDD 427
D+ +F+ D +R+G ED + YA + SE DD+
Sbjct: 20 DLRPAFDVLDADRDGRISREDLKSFYASGAATSERFDDE 58
>07_03_1244 +
25139159-25139252,25139839-25139924,25140103-25140156,
25140633-25140728,25140923-25140974,25141092-25141111
Length = 133
Score = 31.5 bits (68), Expect = 0.64
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = -3
Query: 624 SHQMQLMKDMNN---HEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDXEQNYAMSS 454
SHQ ++K + +L + Q +RS + K E++G D E +
Sbjct: 44 SHQRMMIKRLKGILIGNVLSEDSQAVRSCVGIEAQDGDKKTEKDG-----DDEDEHEEEE 98
Query: 453 VNSENVDDDYEHAYAYIVDDD 391
V EN DDDY + DDD
Sbjct: 99 VEEENSDDDYNQNIEFDDDDD 119
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 131 GGDSWNGRRDSDQHHHRPHPYTTSGHSPATELTNITKN 18
GG WN R D+ P+P+ S ATE+ T N
Sbjct: 175 GGGGWNSRPGWDRRDREPNPFANSEAEEATEVDFDTAN 212
>08_02_0202 -
14202996-14203241,14203630-14203823,14203947-14204559,
14205422-14205535
Length = 388
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = -3
Query: 657 KDFENITKEXESHQMQLMKDMNNHEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDX 478
+D+ N+ + + +M D HEM+I + R + D+P + + RN H D
Sbjct: 14 QDYRNLDDSQKHFLLTMMGDFQ-HEMIIPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDK 72
Query: 477 EQ 472
Q
Sbjct: 73 TQ 74
>06_03_1207 + 28418473-28421073
Length = 866
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = -3
Query: 609 LMKDMNNHEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDXEQNYAMSSVNSENVDD 430
L+KD H+ + L M+ +P T G CD D + + + + +N
Sbjct: 382 LVKDKKLHKAMAL-LTKMQKDGIIPNVI-TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 439
Query: 429 DYEHAYAYIVD 397
EHAYA + D
Sbjct: 440 PDEHAYAVLTD 450
>04_04_1686 + 35362454-35362781,35362891-35363165,35363770-35363880
Length = 237
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 128 GDSWNGRRDSDQHHHRPHPYTTSGHSPA--TELTNITKNLTSIK 3
G S+ R DS +HH RP P+ + +S A + ++ + SIK
Sbjct: 73 GSSFLQRLDSSRHHLRPAPHDSDANSDADTASIASLDDSFISIK 116
>04_01_0310 + 4197835-4197875,4197994-4198924
Length = 323
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = -3
Query: 648 ENITKEXESHQMQLMKDMNNHEMLIYELQTMRSQS 544
E K +S ++++MK++ +H M + E+QT ++ +
Sbjct: 251 EAAAKASDSEKVEIMKELEDHNMKVEEIQTNKNMT 285
>04_04_0537 +
26079926-26079994,26080317-26080500,26081866-26083910,
26084323-26084424,26084566-26084622
Length = 818
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = -3
Query: 594 NNHEMLIYELQTMRSQSDVPQSFETKDIERN-----GHCDSEDXEQNYAMSSVNSENVDD 430
N ++ ++QT + D + +E+ G+CD +D E+NY ++ +++ D
Sbjct: 604 NIEQLYTMKMQTSGASEDKCTDYYQVPLEKEILSSPGNCDRQDSEENYLLAEISTGK--D 661
Query: 429 DYEHAYAYIVDDDLKXRLRKQFRAISTMSLQGLPP 325
A+ V+ L+ + ++ T +PP
Sbjct: 662 GVSDAWNGNVEQSLQQQDHRKLHVGDTALNLSIPP 696
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 393 HHQQYKRKRVHNHHPHFHCSQ 455
HHQQY +++ HH H H Q
Sbjct: 44 HHQQYVQRQPQQHHHHNHHQQ 64
>08_02_0785 +
21190002-21190253,21190452-21190523,21191498-21191631,
21191700-21191850,21191938-21192087
Length = 252
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Frame = +1
Query: 88 WCWSESRRPFQLS-PPRRHGLAQTPQFGQQ------RQIQLTQAGHFFLEINEL*--IKI 240
WC + ++ P +HG P+ RQ + HFF+ N L I I
Sbjct: 94 WCDEKGDLTCEICHEPYKHGYTALPRAHPDETTIDIRQASILYYSHFFIYFNYLPVPITI 153
Query: 241 GGWFFVGCVWRVRSIRIV 294
GGW G + + RI+
Sbjct: 154 GGWTITGTAFDLHDPRII 171
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 140 WRRGGDSWNGRRDSDQHHHRPHPYTTSGHSPAT 42
+RRGG+ NGR +SD H +G PAT
Sbjct: 519 YRRGGNQGNGRNESDSILSPAHFPALTGTIPAT 551
>03_02_0879 +
12097602-12098120,12099215-12099254,12099550-12099601,
12099946-12100008,12100079-12100148,12100452-12100778
Length = 356
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 285 PDRLPRSH*DSSV-VGAGLATTLC*SPGTVYVAXILNHHQQYKRKRVH 425
P+R+ +H +S VGA L T SP + +A + Q KR+RVH
Sbjct: 307 PNRIGDNHPKNSTNVGANLKTAATESPDSPVIATDGSELPQEKRRRVH 354
>04_03_0078 -
10740091-10740154,10740378-10740469,10740624-10740889,
10741010-10741118
Length = 176
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 594 NNHEMLIYELQTMRS-QSDVPQSFETKDIERNGHCDSEDXEQNYAMSSVNSENVDDDYEH 418
NN ++ Y T+ ++ VPQ F K + N S + NY+ S + NV+DD H
Sbjct: 39 NNFPIIQYADDTLIFLEASVPQLFALKAL-LNSFAISSGLKVNYSKSCMIPLNVEDDKAH 97
Query: 417 AYA 409
A
Sbjct: 98 LLA 100
>05_03_0064 + 7946548-7946961
Length = 137
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 555 RSQSDVPQSFETKDIERNGHCDSEDXEQNYAMSSVNSENVDD 430
RS P+ + T D E +G SED E+ + +VDD
Sbjct: 67 RSPPTRPEGYSTSDSEADGWSVSEDDEEEVEEVQLEPMSVDD 108
>04_03_0199 - 12559351-12559433,12559693-12559827,12560260-12560437,
12560848-12561389,12561398-12564827
Length = 1455
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 498 HCDSEDXEQNYAMSSV-NSENVDDDYEHAYA 409
HC D +N+++SSV N +N D H Y+
Sbjct: 1086 HCSCSDKSRNFSLSSVHNGKNDDQASVHDYS 1116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,431,526
Number of Sequences: 37544
Number of extensions: 320143
Number of successful extensions: 1245
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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