Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_B24
(677 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 27 0.22
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.2
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 24 1.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 2.7
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 3.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.7
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 8.2
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 26.6 bits (56), Expect = 0.22
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -3
Query: 633 EXESHQMQLMKDMNNHEMLIYELQTMRSQSDVPQSFETKDIERNGHCDS-EDXEQNYAMS 457
E +S Q + + +E + + +M+ + +VPQS + +RN + + D QN +
Sbjct: 330 EHQSLDRQNIDVVARNEDTLQMVVSMKIKQNVPQSGRVNNTQRNEYLLALSDRNQNVLNN 389
Query: 456 SVNSENVD 433
+N E+V+
Sbjct: 390 DLNLEHVN 397
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 89 HHRPHPYTTSGHSPATELTN 30
HH PHP T G T L N
Sbjct: 464 HHHPHPPETPGPQVETILQN 483
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 24.2 bits (50), Expect = 1.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 76 WGRWWCWSESRRPFQL 123
WG W W+E R+ + L
Sbjct: 169 WGSAWQWNEERKQYYL 184
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/38 (28%), Positives = 14/38 (36%)
Frame = -1
Query: 137 RRGGDSWNGRRDSDQHHHRPHPYTTSGHSPATELTNIT 24
R G SW G H +T+G P T +T
Sbjct: 701 RSGSHSWEGDSFKVSKHEEVSRTSTAGQFPTNVATTVT 738
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 335 ACPHYRRVSVASRKTIRILRTLQTHPTKNHP 243
A PH ++++ + T + ++ HPT N P
Sbjct: 1365 APPHSPQITLTATTTNSLTMKVRPHPTDNAP 1395
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 53 SPATELTNITKNLTSI 6
S A+ +TN+T NLT+I
Sbjct: 951 SSASNVTNVTTNLTTI 966
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 507 FLCPSFQNFAVRQTVTASFVVHKSTSRDCSC 599
F C Q FA + +A + H +SR+ SC
Sbjct: 421 FRCKPSQRFASGRYYSAYSLHHVRSSRESSC 451
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 143 PWRRGGDSWNGR 108
PWR G+ WN R
Sbjct: 135 PWRTCGNPWNTR 146
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 143 PWRRGGDSWNGR 108
PWR G+ WN R
Sbjct: 188 PWRTCGNPWNTR 199
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 3 FNGRKILRYIGE 38
FNG ++ RY+GE
Sbjct: 563 FNGMELARYMGE 574
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 557 CGHSLTYRKVLKR 519
CG +LT+ ++LKR
Sbjct: 339 CGITLTFHEILKR 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,424
Number of Sequences: 438
Number of extensions: 3065
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -