Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B22
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    74   1e-13
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    74   1e-13
Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    73   3e-13
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    66   3e-11
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    58   8e-09
Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical pr...    52   4e-07
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    52   5e-07
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    42   7e-04
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    40   0.002
AF003384-5|AAB54239.2|  324|Caenorhabditis elegans Uncoupling pr...    31   1.0  
Z78542-7|CAB01750.1|  300|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z22180-4|CAA80178.1|  312|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z99288-8|CAB16550.1|  231|Caenorhabditis elegans Hypothetical pr...    28   9.7  
Z75532-5|CAD56651.1|  360|Caenorhabditis elegans Hypothetical pr...    28   9.7  
Z75532-4|CAA99811.1|  310|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 33/55 (60%), Positives = 39/55 (70%)
 Frame = -3

Query: 844 SAXSDILYQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 680
           S   D+LY+NT+ C   I K EG SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 259 SGRKDVLYKNTLDCAVKIIKNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 33/55 (60%), Positives = 39/55 (70%)
 Frame = -3

Query: 844 SAXSDILYQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 680
           S   D+LY+NT+ C   I K EG SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 259 SGRKDVLYKNTLDCAVKIIKNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 34/55 (61%), Positives = 39/55 (70%)
 Frame = -3

Query: 844 SAXSDILYQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 680
           S   DILY+NT+ C   I + EG SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 246 SGRKDILYKNTLDCAKKIIQNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = -3

Query: 844 SAXSDILYQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 680
           S   DILY+NT+ C   I K EG +A +KG  SNV R TGGA VL +YDEI+ ++
Sbjct: 246 SGRKDILYKNTLDCVRKIVKNEGITALYKGGLSNVFRATGGALVLTIYDEIQHLI 300


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 30/55 (54%), Positives = 33/55 (60%)
 Frame = -3

Query: 844 SAXSDILYQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 680
           S   DILY+            EG SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 246 SGRKDILYKKHPRLRKEDHPNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical
           protein R07E3.4 protein.
          Length = 298

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = -3

Query: 823 YQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 680
           Y +T  CW T+ K +G + F++GA +N LR TGGA ++  Y E  K +
Sbjct: 251 YTSTKDCWKTLYKKDGINGFYRGALTNSLRSTGGALIITFYYEFSKYM 298


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = -3

Query: 823 YQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 680
           + NTI C   I   EG  AFF GA  N +RGTG A VL +Y+E++K +
Sbjct: 259 FNNTISCIKYIYTKEGPKAFFHGALVNAIRGTGAALVLAIYNELQKYM 306


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -3

Query: 793 IAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKK 686
           I   EG    +KGA +N+ R  GGA V+ LY+EI K
Sbjct: 269 IVHEEGVRGLYKGALANIFRSAGGALVMALYEEIHK 304


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 823 YQNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEI 692
           Y  T+   + + K EG  A +KG    V+R G GGA +L++YDE+
Sbjct: 237 YSGTMQTISLVYKEEGFGALYKGLLPKVMRLGPGGAVMLIVYDEV 281


>AF003384-5|AAB54239.2|  324|Caenorhabditis elegans Uncoupling
           protein (mitochondrialsubstrate carrier) protein 4
           protein.
          Length = 324

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -3

Query: 826 LYQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVL-VLYDEIKK 686
           LY+  + C+  I K EG  + +KG   + +R    +    V Y+EI+K
Sbjct: 270 LYKGVVDCYIKIIKNEGFFSLYKGFLPSYIRMAPWSLTFWVSYEEIRK 317


>Z78542-7|CAB01750.1|  300|Caenorhabditis elegans Hypothetical
           protein F20D1.9 protein.
          Length = 300

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 835 SDILYQNTIHCWATIAKTEGTSAFFKGA 752
           ++I+Y+N    + TI K EG  A FKGA
Sbjct: 238 NEIVYKNIPDAFVTIFKNEGPKALFKGA 265


>Z22180-4|CAA80178.1|  312|Caenorhabditis elegans Hypothetical
           protein K11H3.3 protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 823 YQNTIHCWATIAKTEGTSAFFKGA---FSNVLRGTGGAFVLVLYDEIKKVL 680
           Y+NT+ C   I K EG  AF+KG     S V    G  F  ++YD I + L
Sbjct: 256 YKNTLDCAMQIWKKEGFFAFYKGTVPRLSRVCLDVGITF--MIYDSIIEFL 304


>Z99288-8|CAB16550.1|  231|Caenorhabditis elegans Hypothetical
           protein ZK262.9 protein.
          Length = 231

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 717 KAPPVPLRTLEKAPLKKAEVPSV 785
           KAPPVPL+  EK     A+VP++
Sbjct: 22  KAPPVPLKKEEKPVQSSAKVPTM 44


>Z75532-5|CAD56651.1|  360|Caenorhabditis elegans Hypothetical
           protein C54G10.4b protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 823 YQNTIHCWATIAKTEGTSAFFKGAFSNVL 737
           Y+ T HC+  I + EG    +KG  S +L
Sbjct: 41  YRGTFHCFKLIVQKEGFRGLYKGMSSPLL 69


>Z75532-4|CAA99811.1|  310|Caenorhabditis elegans Hypothetical
           protein C54G10.4a protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 823 YQNTIHCWATIAKTEGTSAFFKGAFSNVL 737
           Y+ T HC+  I + EG    +KG  S +L
Sbjct: 41  YRGTFHCFKLIVQKEGFRGLYKGMSSPLL 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,601,960
Number of Sequences: 27780
Number of extensions: 342996
Number of successful extensions: 662
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)