Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B22
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    95   7e-22
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    95   7e-22
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.7  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 95.1 bits (226), Expect = 7e-22
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = -3

Query: 841 AXSDILYQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 680
           A S+ILY++T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 247 AKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 27.9 bits (59), Expect = 0.13
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 823 YQNTIHCWATIAKTEGTSAFFKGAFSNVLR 734
           Y+  I C+  I K +G  ++++G  +NV+R
Sbjct: 53  YKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 95.1 bits (226), Expect = 7e-22
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = -3

Query: 841 AXSDILYQNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 680
           A S+ILY++T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 247 AKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 27.9 bits (59), Expect = 0.13
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 823 YQNTIHCWATIAKTEGTSAFFKGAFSNVLR 734
           Y+  I C+  I K +G  ++++G  +NV+R
Sbjct: 53  YKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 690 LISSYKTSTKAPPVPLRTLEKAPL 761
           L++++KT T+ P    + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,333
Number of Sequences: 438
Number of extensions: 4408
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)