Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_B21
(885 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 66 5e-11
01_06_0459 + 29538025-29538579,29539190-29539354,29539448-295395... 62 6e-10
01_06_0648 - 30844289-30844341,30844536-30844648,30845435-308454... 60 2e-09
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 58 1e-08
03_02_0138 + 5837813-5838490,5839000-5839164,5839289-5839426,583... 54 2e-07
01_07_0301 + 42607239-42607277,42607374-42607577,42607669-426079... 39 0.006
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716... 32 0.53
04_04_1202 - 31700414-31700854 30 2.1
03_05_1146 - 30735010-30735216,30735336-30735650,30740169-307401... 30 2.8
>01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 65.7 bits (153), Expect = 5e-11
Identities = 61/291 (20%), Positives = 108/291 (37%), Gaps = 14/291 (4%)
Frame = -3
Query: 880 PQIRAVDLLHKAAYRRGXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQE 701
P+ ++ LH Y L S ++ +++ L+ F ++N T R + G +
Sbjct: 208 PETFLLEALHSTGYSGALATPLIASESSVSRLNTNVLEYFLAENYTAPRIVLAATGVDHD 267
Query: 700 RAALIVQNL--KLTSSDASQAEASTYYGGELRKEIGGDLAHVALA--VQGAPAGSPQXXX 533
I + L + STY GGE R+ VALA V G +
Sbjct: 268 ELVSIAEPLLSDMPGVTGPAKPKSTYVGGEYRRTADSSNTDVALAFEVPGGWLKEKEFVT 327
Query: 532 XXXXXXXLGNGPVTKWGADNSPLAKAIGNI-GPF----AAAGFNVSYSDNGLFGVVLS-- 374
LG G WG L ++ ++ F + A F +S+ G+FG+ S
Sbjct: 328 VSVLQTLLGGGGTYSWGRHGKGLHSSLNHLANEFDQIRSIAAFKDVHSNTGIFGIHTSTD 387
Query: 373 ---VPKDEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLY 203
VPK + + K K+ +L ++ +S E + Q L
Sbjct: 388 AAFVPKAIDLATRELTSLATPGKVDQTQLDRAKATAKSAILMNLESKASATEDMGRQILA 447
Query: 202 TGSVRSAVDIAKDIDQISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 50
G + + K +D ++ DI+ + +++ + GN+ VP D +
Sbjct: 448 FGERKPVEHLLKAVDGVTLKDITALAEKIISSPLTMASHGNVLNVPTYDSV 498
>01_06_0459 + 29538025-29538579,29539190-29539354,29539448-29539585,
29539685-29539836,29539949-29540057,29540281-29540379,
29541051-29541116,29541208-29541315,29541428-29541553
Length = 505
Score = 62.1 bits (144), Expect = 6e-10
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 18/284 (6%)
Frame = -3
Query: 862 DLLHKAAYR-RGXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIG--DSQERAA 692
D LH AA++ G+++ + I IS + L+ + + + T R V+ G + E
Sbjct: 196 DHLHAAAFQGHPLGDTILGPVENIKSISKKDLEQYITTHYTCPRMVVSAAGAVNHDEVVD 255
Query: 691 LIVQNLKLTSSDAS------QAEASTYYGGELRKEIGG-DLAHVALAVQGAPAGSPQXXX 533
+ + S+D + +A + + G E+R E L H A+A +G+ +P
Sbjct: 256 QVREFFTGFSTDPTTVDQLVEANPAIFTGSEVRVEQPEMPLTHFAIAFKGSSWANPSSIP 315
Query: 532 XXXXXXXLG--NGPVTKWGADNSPLAKAIGNIGPFAAA--GFNVSYSDNGLFGVVLSVPK 365
LG N + S LA+ I N G A + FN +Y D GLFG+
Sbjct: 316 LMVIQSILGTWNRSIGVGNCSGSALARGISN-GNLAESMIAFNTNYRDTGLFGICTIAQP 374
Query: 364 D---EXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGS 194
D + +S + +NQLK+ +L D ++++E+ Q L G
Sbjct: 375 DSLYDLSQLIMQEFRRLAFEVSETEVARARNQLKSALLLHIDGSTAVSENNGRQMLTYGR 434
Query: 193 VRSAVDIAKDIDQISNNDISQAVSNAAKNK-ISIGAVGNLAFVP 65
V +++ ID + + + + + +K I++ AVG L +P
Sbjct: 435 VMPFLELFARIDAVDRDTVMETAKDFIIDKDIALAAVGPLTNLP 478
>01_06_0648 - 30844289-30844341,30844536-30844648,30845435-30845484,
30845572-30845642,30845725-30845797,30846744-30846841,
30846936-30847002,30847150-30847230,30847312-30847479,
30847563-30847730,30847813-30848109,30848205-30848426,
30849287-30849325
Length = 499
Score = 60.1 bits (139), Expect = 2e-09
Identities = 63/288 (21%), Positives = 108/288 (37%), Gaps = 16/288 (5%)
Frame = -3
Query: 880 PQIRAVDLLHKAAYRRGXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQE 701
PQ ++ LH A Y L I+ + S L+ F ++N T R + G +
Sbjct: 201 PQGLLLEALHSAGYSGALAKPLMAPQSAIHRLDSSILEEFIAENYTAPRMVLAASGVEHD 260
Query: 700 RAALIVQNL--KLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAG----SPQX 539
I + L L S + S Y GG+ R + D H+ALA + P G
Sbjct: 261 ELVSIAEPLLSDLPSVKRPEEPKSVYVGGDYRCQADSDKTHIALAFE-VPGGWFEEKTAI 319
Query: 538 XXXXXXXXXLGNGPVTKWGAD---NSPL-AKAIGNIGPFAA-AGFNVSYSDNGLFGVVLS 374
G G + G +S L + + N + + FN Y+ +GLFG+ +
Sbjct: 320 IVTVLQMLMGGGGSFSAGGPGKGMHSRLYLRILNNYHQIESFSAFNSIYNHSGLFGIHAT 379
Query: 373 -----VPKDEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQG 209
K ++ + + K K+ VL ++ +E + Q
Sbjct: 380 TSPNFASKAVDLAAGELLEVATPGKVTQEQLDRAKQATKSAVLMNLESRVVASEDIGRQI 439
Query: 208 LYTGSVRSAVDIAKDIDQISNNDISQAVSNAAKNKISIGAVGNLAFVP 65
L G + KD++ I+ NDIS + +++ + G++ VP
Sbjct: 440 LTYGERKPIEHFLKDLEAITLNDISSTAKKIISSPLTLASWGDVIHVP 487
>05_06_0132 + 25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 57.6 bits (133), Expect = 1e-08
Identities = 56/285 (19%), Positives = 107/285 (37%), Gaps = 16/285 (5%)
Frame = -3
Query: 865 VDLLHKAAYRRGXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQERAALI 686
++ LH A Y L S +N + +L+ F S+N T R + G + +
Sbjct: 258 MEALHSAGYSGALAKPLMASESAVNRLDVATLEEFVSENYTAPRMVLAASGIEHDELVSV 317
Query: 685 VQNL--KLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGSPQ----XXXXXX 524
+ L L S + S Y GG+ + H+ALA + P G Q
Sbjct: 318 AEPLLSDLPSVKRPEEPKSVYVGGDYHCQADSTSTHIALAFE-VPGGWRQEKTAMIVTVL 376
Query: 523 XXXXLGNGPVTKWGADNSP----LAKAIGNIGPFAA-AGFNVSYSDNGLFGVVLSVPKD- 362
G G + G + + N G + + F+ Y+++GLFG+ + D
Sbjct: 377 QVLMGGGGSFSTGGPGKGMHSWLYLRVLNNYGQIESFSAFSSIYNNSGLFGIHATTNPDF 436
Query: 361 ----EXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGS 194
++ + + K K+ VL + ++ +E + Q L G
Sbjct: 437 VSSAVDLAARELHEVATPGKVTQEQLDRAKEATKSSVLMDLESRIVASEDIGRQVLTYGE 496
Query: 193 VRSAVDIAKDIDQISNNDISQAVSNAAKNKISIGAVGNLAFVPYI 59
+ K +++I+ NDIS + +++ + G++A ++
Sbjct: 497 RKPIEYFLKTVEEITLNDISSTAKKIISSPLTLASWGDVACCVFV 541
>03_02_0138 + 5837813-5838490,5839000-5839164,5839289-5839426,
5839496-5839647,5839754-5839862,5840551-5840649,
5840739-5840804,5840891-5840998,5841820-5841906
Length = 533
Score = 54.0 bits (124), Expect = 2e-07
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 21/287 (7%)
Frame = -3
Query: 862 DLLHKAAYR-RGXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIG-----DSQE 701
D LH A++ G + S + + I+ E LQ + + T R +T G D E
Sbjct: 237 DHLHATAFQYTSLGRPILGSAENVKSITQEDLQKYIETHYTAPRMVITAAGAVKHDDIVE 296
Query: 700 RAALIVQNLKL---TSSDASQAEASTYYGGELRKEIGGD--LAHVALAVQGAPAGSPQXX 536
A + +L T+S + + + G E+R I D LA A+A GA P
Sbjct: 297 MATKLFNDLPTDPTTTSMLVSTQPACFTGSEVRI-IDDDMPLAQFAVAFNGASWIDPDSI 355
Query: 535 XXXXXXXXLGNGPVTKWGADN--SPLAK--AIGNIGPFAAAGFNVSYSDNGLFGVVLSVP 368
LG+ + G + S L + AI +I A FN +Y D GLFG V +V
Sbjct: 356 ALMVMQSMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMA-FNTNYKDTGLFG-VYAVA 413
Query: 367 KDEXXXXXXXXXXXXKTSLS-----ADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLY 203
K + + LS D I+A +NQLK+ + D +++ E + Q L
Sbjct: 414 KPDCLDDLAFAIMQEISKLSYRVTEEDVIRA-RNQLKSSIQLHLDGSTAVVEDIGRQLLI 472
Query: 202 TGSVRSAVDIAKDIDQISNNDISQAVSNAAKNK-ISIGAVGNLAFVP 65
G ++ ID + + + + + ++ I+I A+G + +P
Sbjct: 473 YGRRIPIPELFARIDAVDASTVKRVANRFIFDQDIAIAAMGPIQGLP 519
>01_07_0301 + 42607239-42607277,42607374-42607577,42607669-42607965,
42608055-42608222,42608393-42608560,42608653-42608733,
42608844-42608910,42609326-42609423,42609665-42609737,
42609826-42609896,42610013-42610062,42610145-42610257,
42610341-42610384
Length = 490
Score = 38.7 bits (86), Expect = 0.006
Identities = 54/280 (19%), Positives = 99/280 (35%), Gaps = 16/280 (5%)
Frame = -3
Query: 856 LHKAAYRRGXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQERAALIVQN 677
L+ Y N L + + I+ +Q F +N T R V G + + +
Sbjct: 203 LNLVGYTGALANPLVAPEESLTRINGSIIQKFYHENFTADRLVVAASGVDHQYLLDVAEP 262
Query: 676 LKLTSSDASQAEA--STYYGGELRKEIGGDLAHVALAVQGAPAG----SPQXXXXXXXXX 515
L S E S Y GG+ R ++ HVALA + P G
Sbjct: 263 LLSDWHKGSPVERPESKYIGGDFRHRADSEMTHVALAFE-VPGGWLEERDATIMTVVQTL 321
Query: 514 XLGNGPVTKWGADNSPLAKAIGNI--GPFAAAGFNV---SYSDNGLFGVVLSVPKDEXXX 350
G G + G ++ + F+V ++ +GLFG+ L+ P D
Sbjct: 322 MGGGGSFSSGGPGKGMHSRLYLRVLTKYHTVESFSVFSNAFDRSGLFGIYLTTPSDFVAK 381
Query: 349 XXXXXXXXXKT-----SLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRS 185
++ + KN + VL ++ +AE + Q L G +
Sbjct: 382 AVDIATKELIAIATPGQVTDIELARAKNSTISAVLMNLESRVIVAEDIGRQILTYGCRKP 441
Query: 184 AVDIAKDIDQISNNDISQAVSNAAKNKISIGAVGNLAFVP 65
+ +D+++ +DI+ + ++ + G++ VP
Sbjct: 442 VDHFLQCMDEMTLDDITAFAKKMLSSPPTMASWGDVDKVP 481
>01_01_0908 +
7158172-7158356,7159436-7159866,7159953-7161061,
7161372-7162820
Length = 1057
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -3
Query: 316 SLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDI 137
++ D +K+ KN+ K + + D GSSL L + TGSV V A +SN +
Sbjct: 423 TVGEDGLKSSKNKTKRKYSDVVDDGSSLMNWLNGKKKRTGSVHHTV--AHPAGNLSNKKV 480
Query: 136 SQAVS 122
+ S
Sbjct: 481 TPTAS 485
>04_04_1202 - 31700414-31700854
Length = 146
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -3
Query: 784 SSESLQLFASQNITPSRCAVTVIGDSQERAALI--VQNLKLTSSDASQAEASTYYG 623
S SL L RC V V+G S AA++ + L L ++ AS+A A + G
Sbjct: 90 SCSSLVLVRRAEAKEKRCVVVVVGSSAASAAIVHGEKRLHLAAAPASEAAACSEIG 145
>03_05_1146 -
30735010-30735216,30735336-30735650,30740169-30740191,
30740591-30740666,30740764-30740889,30740968-30741033,
30741296-30741539,30741639-30741691
Length = 369
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -2
Query: 731 CCYCNW*FSGKGCIDCSK-PKIDL-IGCFS 648
C YCN SGK I CSK P DL + CFS
Sbjct: 53 CNYCNKDISGKIRIKCSKCPDFDLCVECFS 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,738,395
Number of Sequences: 37544
Number of extensions: 404632
Number of successful extensions: 894
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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