Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_B21
(885 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 135 2e-31
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 135 2e-31
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 133 7e-31
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 48 6e-05
AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein pr... 48 6e-05
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 47 8e-05
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 39 0.028
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 38 0.037
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 38 0.037
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 135 bits (327), Expect = 2e-31
Identities = 85/285 (29%), Positives = 128/285 (44%), Gaps = 8/285 (2%)
Frame = -3
Query: 880 PQIRAVDLLHKAAYRRGXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQE 701
PQ ++ LH AAYR N L+ RI ++SE L F + T +R A+ +G S
Sbjct: 169 PQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARMALIGLGVSHP 228
Query: 700 RAALIVQN-LKLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGSPQXXXXXX 524
+ + L + + Y GGE+R++ G L H A + A AGS +
Sbjct: 229 VLKQVAEQFLNMRGGLGLSGAKANYRGGEIREQNGDSLVHAAFVAESAVAGSAEANAFSV 288
Query: 523 XXXXLGNGPVTKWGADN-SPLAKAIGNIG--PFAAAGFNVSYSDNGLFGVVL----SVPK 365
LG GP K G++ S L +A+ PF + FN SYSD+GLFG+ +
Sbjct: 289 LQHVLGAGPHVKRGSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGIYTISQATAAG 348
Query: 364 DEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRS 185
D + +LS ++A KN+LK L ++ E + +Q L GS
Sbjct: 349 DVIKAAYNQVKTIAQGNLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMP 408
Query: 184 AVDIAKDIDQISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 50
+ + ID ++N DI A + S+ A GNL P++DEL
Sbjct: 409 PSTVLQQIDSVANADIINAAKKFVSGQKSMAASGNLGHTPFVDEL 453
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 135 bits (327), Expect = 2e-31
Identities = 85/285 (29%), Positives = 128/285 (44%), Gaps = 8/285 (2%)
Frame = -3
Query: 880 PQIRAVDLLHKAAYRRGXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQE 701
PQ ++ LH AAYR N L+ RI ++SE L F + T +R A+ +G S
Sbjct: 169 PQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARMALIGLGVSHP 228
Query: 700 RAALIVQN-LKLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGSPQXXXXXX 524
+ + L + + Y GGE+R++ G L H A + A AGS +
Sbjct: 229 VLKQVAEQFLNMRGGLGLSGAKANYRGGEIREQNGDSLVHAAFVAESAVAGSAEANAFSV 288
Query: 523 XXXXLGNGPVTKWGADN-SPLAKAIGNIG--PFAAAGFNVSYSDNGLFGVVL----SVPK 365
LG GP K G++ S L +A+ PF + FN SYSD+GLFG+ +
Sbjct: 289 LQHVLGAGPHVKRGSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGIYTISQATAAG 348
Query: 364 DEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRS 185
D + +LS ++A KN+LK L ++ E + +Q L GS
Sbjct: 349 DVIKAAYNQVKTIAQGNLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMP 408
Query: 184 AVDIAKDIDQISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 50
+ + ID ++N DI A + S+ A GNL P++DEL
Sbjct: 409 PSTVLQQIDSVANADIINAAKKFVSGQKSMAASGNLGHTPFVDEL 453
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 133 bits (322), Expect = 7e-31
Identities = 84/285 (29%), Positives = 128/285 (44%), Gaps = 8/285 (2%)
Frame = -3
Query: 880 PQIRAVDLLHKAAYRRGXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQE 701
PQ ++ LH AAY+ N L+ RI ++SE L F + T +R A+ +G S
Sbjct: 169 PQTHVIENLHAAAYQNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARMALIGLGVSHP 228
Query: 700 RAALIVQN-LKLTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGSPQXXXXXX 524
+ + L + + Y GGE+R++ G L H A + A AGS +
Sbjct: 229 VLKQVAEQFLNMRGGLGLSGAKANYRGGEIREQNGDSLVHAAFVAESAVAGSAEANAFSV 288
Query: 523 XXXXLGNGPVTKWGADN-SPLAKAIGNIG--PFAAAGFNVSYSDNGLFGVVL----SVPK 365
LG GP K G++ S L +A+ PF + FN SYSD+GLFG+ +
Sbjct: 289 LQHVLGAGPHVKRGSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGIYTISQATAAG 348
Query: 364 DEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRS 185
D + +LS ++A KN+LK L ++ E + +Q L GS
Sbjct: 349 DVIKAAYNQVKRIAQGNLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMP 408
Query: 184 AVDIAKDIDQISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 50
+ + ID ++N DI A + S+ A GNL P++DEL
Sbjct: 409 PSTVLQQIDSVANADIINAAKKFVSGQKSMAASGNLGHTPFVDEL 453
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 47.6 bits (108), Expect = 6e-05
Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 16/282 (5%)
Frame = -3
Query: 862 DLLHKAAYRR-GXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQERAALI 686
D LH AY+ G ++ + I IS + L + + + R + G L
Sbjct: 186 DYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLD 245
Query: 685 VQNLKLTSS------DASQAEASTYYGGELR-KEIGGDLAHVALAVQGAPAGSPQXXXXX 527
+ S + + G E+R ++ LAH+A+AV+ P
Sbjct: 246 LAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLM 305
Query: 526 XXXXXLGNGPVTKWGADN--SPLAKAI--GNIGPFAAAGFNVSYSDNGLFGVVL---SVP 368
+GN + G N S LA+ GN+ + FN SY+D GL+G+ + S
Sbjct: 306 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLC-HSFQSFNTSYTDTGLWGLYMVCESST 364
Query: 367 KDEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVR 188
+ TS++ + +N LKT +L + D + + E + Q L
Sbjct: 365 VADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRI 424
Query: 187 SAVDIAKDIDQISNNDISQAVSNAAKNKI-SIGAVGNLAFVP 65
++ ID ++ I + + N+ +I AVG + +P
Sbjct: 425 PIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLP 466
>AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein
protein.
Length = 316
Score = 47.6 bits (108), Expect = 6e-05
Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 16/282 (5%)
Frame = -3
Query: 862 DLLHKAAYRR-GXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQERAALI 686
D LH AY+ G ++ + I IS + L + + + R + G L
Sbjct: 22 DYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLD 81
Query: 685 VQNLKLTSS------DASQAEASTYYGGELR-KEIGGDLAHVALAVQGAPAGSPQXXXXX 527
+ S + + G E+R ++ LAH+A+AV+ P
Sbjct: 82 LAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLM 141
Query: 526 XXXXXLGNGPVTKWGADN--SPLAKAI--GNIGPFAAAGFNVSYSDNGLFGVVL---SVP 368
+GN + G N S LA+ GN+ + FN SY+D GL+G+ + S
Sbjct: 142 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLC-HSFQSFNTSYTDTGLWGLYMVCESST 200
Query: 367 KDEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVR 188
+ TS++ + +N LKT +L + D + + E + Q L
Sbjct: 201 VADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRI 260
Query: 187 SAVDIAKDIDQISNNDISQAVSNAAKNKI-SIGAVGNLAFVP 65
++ ID ++ I + + N+ +I AVG + +P
Sbjct: 261 PIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLP 302
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 47.2 bits (107), Expect = 8e-05
Identities = 62/280 (22%), Positives = 107/280 (38%), Gaps = 16/280 (5%)
Frame = -3
Query: 862 DLLHKAAYRR-GXGNSLFISPKRINDISSESLQLFASQNITPSRCAVTVIGDSQERAALI 686
D LH AY+ G ++ + I IS + L + + + R + G L
Sbjct: 195 DYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLD 254
Query: 685 VQNLKLTSS------DASQAEASTYYGGELR-KEIGGDLAHVALAVQGAPAGSPQXXXXX 527
+ S + + G E+R ++ LAH+A+AV+ P
Sbjct: 255 LAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLM 314
Query: 526 XXXXXLGNGPVTKWGADN--SPLAKAI--GNIGPFAAAGFNVSYSDNGLFGVVL---SVP 368
+GN + G N S LA+ GN+ + FN SY+D GL+G+ + S
Sbjct: 315 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLC-HSFQSFNTSYTDTGLWGLYMVCESST 373
Query: 367 KDEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVR 188
+ TS++ + +N LKT +L + D + + E + Q L
Sbjct: 374 VADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRI 433
Query: 187 SAVDIAKDIDQISNNDISQAVSNAAKNKI-SIGAVGNLAF 71
++ ID ++ I + + N+ +I AVG F
Sbjct: 434 PIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGKPGF 473
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 38.7 bits (86), Expect = 0.028
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 7/152 (4%)
Frame = -3
Query: 631 YYGGELR-KEIGGDLAHVALAVQGAPAGSPQXXXXXXXXXXLGNGPVTKWGAD--NSPLA 461
+ G E+R ++ AHVA+AV+G SP +G+ T G +SPLA
Sbjct: 270 FTGSEIRHRDDALPFAHVAIAVEGPGWASPDSVALQVANAIIGHYDCTYGGGVHLSSPLA 329
Query: 460 K-AIGNIGPFAAAGFNVSYSDNGLFG---VVLSVPKDEXXXXXXXXXXXXKTSLSADAIK 293
A+ N + F++ Y++ GL G V + D+ TS + +
Sbjct: 330 SGAVANKLCQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVA 389
Query: 292 AGKNQLKTQVLNEADTGSSLAESLAAQGLYTG 197
GKN L+ +++ D + + E + L G
Sbjct: 390 RGKNILRNALVSHLDGTTPVCEDIGRSLLTYG 421
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 38.3 bits (85), Expect = 0.037
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 7/152 (4%)
Frame = -3
Query: 631 YYGGELR-KEIGGDLAHVALAVQGAPAGSPQXXXXXXXXXXLGNGPVTKWGAD--NSPLA 461
+ G E+R ++ AHVA+AV+G SP +G+ T G +SPLA
Sbjct: 270 FTGSEIRHRDDALPFAHVAIAVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLA 329
Query: 460 K-AIGNIGPFAAAGFNVSYSDNGLFG---VVLSVPKDEXXXXXXXXXXXXKTSLSADAIK 293
A+ N + F++ Y++ GL G V + D+ TS + +
Sbjct: 330 SGAVANKLCQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVA 389
Query: 292 AGKNQLKTQVLNEADTGSSLAESLAAQGLYTG 197
GKN L+ +++ D + + E + L G
Sbjct: 390 RGKNILRNALVSHLDGTTPVCEDIGRSLLTYG 421
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 38.3 bits (85), Expect = 0.037
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 7/152 (4%)
Frame = -3
Query: 631 YYGGELR-KEIGGDLAHVALAVQGAPAGSPQXXXXXXXXXXLGNGPVTKWGAD--NSPLA 461
+ G E+R ++ AHVA+AV+G SP +G+ T G +SPLA
Sbjct: 270 FTGSEIRHRDDALPFAHVAIAVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLA 329
Query: 460 K-AIGNIGPFAAAGFNVSYSDNGLFG---VVLSVPKDEXXXXXXXXXXXXKTSLSADAIK 293
A+ N + F++ Y++ GL G V + D+ TS + +
Sbjct: 330 SGAVANKLCQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVA 389
Query: 292 AGKNQLKTQVLNEADTGSSLAESLAAQGLYTG 197
GKN L+ +++ D + + E + L G
Sbjct: 390 RGKNILRNALVSHLDGTTPVCEDIGRSLLTYG 421
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,951,479
Number of Sequences: 237096
Number of extensions: 2101639
Number of successful extensions: 4273
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4258
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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