Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B21
         (885 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   3.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   4.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   4.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   8.6  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 442 GPFAAAGFNVSYSDNGLFGVVLS 374
           G +   G N  + + G+FG+ LS
Sbjct: 242 GDYNIGGLNFQWGEEGIFGMSLS 264


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 459 RPSATSAHSQRPDSTLATATMDYSALFY 376
           RP + S   Q  +S   T+T+  S +FY
Sbjct: 553 RPGSNSIERQSSESPFTTSTIMPSDIFY 580


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 459 RPSATSAHSQRPDSTLATATMDYSALFY 376
           RP + S   Q  +S   T+T+  S +FY
Sbjct: 553 RPGSNSIERQSSESPFTTSTIMPSDIFY 580


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 846 QPIVVXWVTRXSSRQR 799
           QPI   W+TR  +R++
Sbjct: 81  QPISYKWITRSGTREQ 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,146
Number of Sequences: 438
Number of extensions: 3684
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)