Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B19
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    28   0.30 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       26   1.6  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   3.7  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   4.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 28.3 bits (60), Expect = 0.30
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +1

Query: 250 LIVGTVLLFAFATF*HFCFGALNCGKLCIINSFFNELFSQLFHFITCHFFRSHFS*T*C 426
           ++ GT   F   +F  +CF + +C +   +  F N +F  L HF+   F    FS   C
Sbjct: 20  VVRGTGKPFLPTSFLIYCFVSPSCLECSSVPLFINFIFMFLLHFVLFSFSFPFFSFAPC 78


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 73  NQIIVNVIKHMILKMYHYSKYLNHLSRLFRAVLAKFP 183
           N I+V   KH+ LK++H  K   +  RL  A     P
Sbjct: 588 NAIVVPESKHIPLKVFHVDKGRRYRFRLINAEFLNCP 624


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -1

Query: 713 IEIRNCQHH--FHHSPTLQMQ*GSSVENF 633
           ++ RNC HH  FH S   ++  G S++ F
Sbjct: 364 VQSRNCNHHHGFHPSTVCKIPPGCSLKIF 392


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 263 QFFFLHLPHFNISVLVP*TVASCASSIASLMN-FSLNFFISSLA 391
           +F  LHL + NIS L   T AS +S  A +   ++ N  I++LA
Sbjct: 706 RFIELHLENNNISALPDSTTASGSSGWAEVRELYASNNSIAALA 749


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,909
Number of Sequences: 2352
Number of extensions: 13241
Number of successful extensions: 49
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)