Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_B19
(812 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53670-1|CAA37710.1| 313|Drosophila melanogaster protein ( Dros... 274 1e-73
L26091-1|AAA92864.2| 313|Drosophila melanogaster transcription ... 274 1e-73
AY051843-1|AAK93267.1| 313|Drosophila melanogaster LD34766p pro... 274 1e-73
AE014134-2559|AAF53436.1| 313|Drosophila melanogaster CG3710-PA... 274 1e-73
BT023150-1|AAY55566.1| 162|Drosophila melanogaster IP09061p pro... 187 1e-47
BT022128-1|AAY51523.1| 162|Drosophila melanogaster IP08861p pro... 187 1e-47
AE014298-2184|AAF48482.2| 162|Drosophila melanogaster CG8117-PA... 187 1e-47
AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA... 48 2e-05
AE013599-3053|AAM68394.2| 108|Drosophila melanogaster CG33785-P... 46 6e-05
AE014297-3039|AAF55918.1| 120|Drosophila melanogaster CG13418-P... 36 0.050
AE014297-1835|AAF55045.1| 129|Drosophila melanogaster CG3284-PA... 36 0.087
S88139-1|AAB21674.1| 129|Drosophila melanogaster RNA polymerase... 34 0.27
S66940-1|AAB29028.2| 129|Drosophila melanogaster RNA polymerase... 33 0.35
AF177931-1|AAF33110.1| 1162|Drosophila melanogaster adenylyl cyc... 30 3.3
AE014296-423|AAF47621.2| 1162|Drosophila melanogaster CG5712-PA ... 30 3.3
AY075234-1|AAL68101.2| 541|Drosophila melanogaster AT19549p pro... 29 5.7
AE014298-1105|AAF46310.2| 465|Drosophila melanogaster CG15333-P... 29 5.7
>X53670-1|CAA37710.1| 313|Drosophila melanogaster protein (
Drosophila gene forRNA polymerase II elongation factor
DmS-II. ).
Length = 313
Score = 274 bits (671), Expect = 1e-73
Identities = 124/170 (72%), Positives = 140/170 (82%)
Frame = -3
Query: 681 PQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXECIYAEFKNTDMRYKNRV 502
P TDAVR+KCRE+L ALK GE CG P + IY+EF NTDM+YKNR+
Sbjct: 145 PSGGMTDAVRIKCREMLATALKI-GEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRI 203
Query: 501 RSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLA 322
RSRVANLKDPKNP LR NF G ++A +LAKMTPEEMASDEMKKLREKF+KEAI+DAQLA
Sbjct: 204 RSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLA 263
Query: 321 TVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 172
TVQGTKT++LKC KCKK+NCTYNQLQTRS+DEPMTTFV+CNECGNRWKFC
Sbjct: 264 TVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
>L26091-1|AAA92864.2| 313|Drosophila melanogaster transcription
elongation factor protein.
Length = 313
Score = 274 bits (671), Expect = 1e-73
Identities = 124/170 (72%), Positives = 140/170 (82%)
Frame = -3
Query: 681 PQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXECIYAEFKNTDMRYKNRV 502
P TDAVR+KCRE+L ALK GE CG P + IY+EF NTDM+YKNR+
Sbjct: 145 PSGGMTDAVRIKCREMLATALKI-GEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRI 203
Query: 501 RSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLA 322
RSRVANLKDPKNP LR NF G ++A +LAKMTPEEMASDEMKKLREKF+KEAI+DAQLA
Sbjct: 204 RSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLA 263
Query: 321 TVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 172
TVQGTKT++LKC KCKK+NCTYNQLQTRS+DEPMTTFV+CNECGNRWKFC
Sbjct: 264 TVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
>AY051843-1|AAK93267.1| 313|Drosophila melanogaster LD34766p
protein.
Length = 313
Score = 274 bits (671), Expect = 1e-73
Identities = 124/170 (72%), Positives = 140/170 (82%)
Frame = -3
Query: 681 PQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXECIYAEFKNTDMRYKNRV 502
P TDAVR+KCRE+L ALK GE CG P + IY+EF NTDM+YKNR+
Sbjct: 145 PSGGMTDAVRIKCREMLATALKI-GEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRI 203
Query: 501 RSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLA 322
RSRVANLKDPKNP LR NF G ++A +LAKMTPEEMASDEMKKLREKF+KEAI+DAQLA
Sbjct: 204 RSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLA 263
Query: 321 TVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 172
TVQGTKT++LKC KCKK+NCTYNQLQTRS+DEPMTTFV+CNECGNRWKFC
Sbjct: 264 TVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
>AE014134-2559|AAF53436.1| 313|Drosophila melanogaster CG3710-PA
protein.
Length = 313
Score = 274 bits (671), Expect = 1e-73
Identities = 124/170 (72%), Positives = 140/170 (82%)
Frame = -3
Query: 681 PQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXECIYAEFKNTDMRYKNRV 502
P TDAVR+KCRE+L ALK GE CG P + IY+EF NTDM+YKNR+
Sbjct: 145 PSGGMTDAVRIKCREMLATALKI-GEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRI 203
Query: 501 RSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLA 322
RSRVANLKDPKNP LR NF G ++A +LAKMTPEEMASDEMKKLREKF+KEAI+DAQLA
Sbjct: 204 RSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLA 263
Query: 321 TVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 172
TVQGTKT++LKC KCKK+NCTYNQLQTRS+DEPMTTFV+CNECGNRWKFC
Sbjct: 264 TVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
>BT023150-1|AAY55566.1| 162|Drosophila melanogaster IP09061p
protein.
Length = 162
Score = 187 bits (456), Expect = 1e-47
Identities = 83/160 (51%), Positives = 114/160 (71%)
Frame = -3
Query: 657 VRLKCRELLTQALKAAGETSNACGSPXXXXXXXXECIYAEFKNTDMRYKNRVRSRVANLK 478
+R+KCRE+L ALK+ G CG P + IY + ++YKNR+RSR+ANL+
Sbjct: 5 IRIKCREMLATALKS-GNMPPGCGDPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLR 63
Query: 477 DPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLATVQGTKTE 298
DPKNP LR F G I+ L+KMTPEEMASD+MK++R+K+++++I+ AQ+A VQGTKT+
Sbjct: 64 DPKNPELRQKFLLGQITPEELSKMTPEEMASDDMKQMRQKYVQDSINAAQMAKVQGTKTD 123
Query: 297 MLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 178
KC +C K+NC +QL R DEP+ TFV+C+ECGNRWK
Sbjct: 124 QFKCERCDKRNC--SQLHIRDGDEPIITFVICDECGNRWK 161
>BT022128-1|AAY51523.1| 162|Drosophila melanogaster IP08861p
protein.
Length = 162
Score = 187 bits (456), Expect = 1e-47
Identities = 83/160 (51%), Positives = 114/160 (71%)
Frame = -3
Query: 657 VRLKCRELLTQALKAAGETSNACGSPXXXXXXXXECIYAEFKNTDMRYKNRVRSRVANLK 478
+R+KCRE+L ALK+ G CG P + IY + ++YKNR+RSR+ANL+
Sbjct: 5 IRIKCREMLATALKS-GNMPPGCGDPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLR 63
Query: 477 DPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLATVQGTKTE 298
DPKNP LR F G I+ L+KMTPEEMASD+MK++R+K+++++I+ AQ+A VQGTKT+
Sbjct: 64 DPKNPELRQKFLLGQITPEELSKMTPEEMASDDMKQMRQKYVQDSINAAQMAKVQGTKTD 123
Query: 297 MLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 178
KC +C K+NC +QL R DEP+ TFV+C+ECGNRWK
Sbjct: 124 QFKCERCDKRNC--SQLHIRDGDEPIITFVICDECGNRWK 161
>AE014298-2184|AAF48482.2| 162|Drosophila melanogaster CG8117-PA
protein.
Length = 162
Score = 187 bits (456), Expect = 1e-47
Identities = 83/160 (51%), Positives = 114/160 (71%)
Frame = -3
Query: 657 VRLKCRELLTQALKAAGETSNACGSPXXXXXXXXECIYAEFKNTDMRYKNRVRSRVANLK 478
+R+KCRE+L ALK+ G CG P + IY + ++YKNR+RSR+ANL+
Sbjct: 5 IRIKCREMLATALKS-GNMPPGCGDPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLR 63
Query: 477 DPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLATVQGTKTE 298
DPKNP LR F G I+ L+KMTPEEMASD+MK++R+K+++++I+ AQ+A VQGTKT+
Sbjct: 64 DPKNPELRQKFLLGQITPEELSKMTPEEMASDDMKQMRQKYVQDSINAAQMAKVQGTKTD 123
Query: 297 MLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 178
KC +C K+NC +QL R DEP+ TFV+C+ECGNRWK
Sbjct: 124 QFKCERCDKRNC--SQLHIRDGDEPIITFVICDECGNRWK 161
>AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA
protein.
Length = 2016
Score = 47.6 bits (108), Expect = 2e-05
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = -3
Query: 534 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKF 355
++ +YK + RS + N+KD KN TL + +L +MTPE++AS E+ K RE+
Sbjct: 1330 RDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEE 1389
Query: 354 IKEAID 337
+ +D
Sbjct: 1390 NRHQLD 1395
>AE013599-3053|AAM68394.2| 108|Drosophila melanogaster CG33785-PA,
isoform A protein.
Length = 108
Score = 46.0 bits (104), Expect = 6e-05
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -3
Query: 291 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 178
+C C K + Q+QTRS+DEPMTTF C +EC + W+
Sbjct: 68 ECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWR 107
>AE014297-3039|AAF55918.1| 120|Drosophila melanogaster CG13418-PA
protein.
Length = 120
Score = 36.3 bits (80), Expect = 0.050
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 291 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNEC 193
KC KC +Y LQ RS+DE T F C +C
Sbjct: 80 KCPKCNHDKMSYATLQLRSADEGQTVFFTCLKC 112
>AE014297-1835|AAF55045.1| 129|Drosophila melanogaster CG3284-PA
protein.
Length = 129
Score = 35.5 bits (78), Expect = 0.087
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 306 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRW 181
+TE C KC + + Q QTR ++E M + +C C +RW
Sbjct: 84 RTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>S88139-1|AAB21674.1| 129|Drosophila melanogaster RNA polymerase II
15-kda subunit protein.
Length = 129
Score = 33.9 bits (74), Expect = 0.27
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 306 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRW 181
+TE C KC + + + QTR ++E M + +C C +RW
Sbjct: 84 RTEDHACPKCSHREAVFFKAQTRRAEEEMRLYYVCTNQNCTHRW 127
>S66940-1|AAB29028.2| 129|Drosophila melanogaster RNA polymerase II
subunit 9 protein.
Length = 129
Score = 33.5 bits (73), Expect = 0.35
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 306 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRW 181
+TE C KC + Q QTR ++E M + +C C +RW
Sbjct: 84 RTEDHACPKCSHREAVSFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>AF177931-1|AAF33110.1| 1162|Drosophila melanogaster adenylyl
cyclase ACXD protein.
Length = 1162
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 193 TFITKDKCGHRFIGTSCL*LIVGTVLLFAFATF-*HFCFGAL-NCGKLCIINSFFNELFS 366
T+ + +C H +I T+C+ L++G LF F CF AL G ++ S FN +++
Sbjct: 733 TYDERVQCFHPWILTNCMTLVIGMSFLFTRIPFIIKSCFSALIMIGYAVLVVSEFNFIYA 792
>AE014296-423|AAF47621.2| 1162|Drosophila melanogaster CG5712-PA
protein.
Length = 1162
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 193 TFITKDKCGHRFIGTSCL*LIVGTVLLFAFATF-*HFCFGAL-NCGKLCIINSFFNELFS 366
T+ + +C H +I T+C+ L++G LF F CF AL G ++ S FN +++
Sbjct: 733 TYDERVQCFHPWILTNCMTLVIGMSFLFTRIPFIIKSCFSALIMIGYAVLVVSEFNFIYA 792
>AY075234-1|AAL68101.2| 541|Drosophila melanogaster AT19549p
protein.
Length = 541
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -3
Query: 444 FNGVISASR-LAKMTPEEMASDEMKKLREKFIKEAIDDAQ-LATVQGTK 304
+NG I+ + K+ EE A D +KK++ + K+A DDA+ AT+ G K
Sbjct: 315 YNGSITPPLFVGKICREEPAVDMIKKIQFEIEKKASDDAESKATLAGVK 363
>AE014298-1105|AAF46310.2| 465|Drosophila melanogaster CG15333-PA
protein.
Length = 465
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -3
Query: 444 FNGVISASR-LAKMTPEEMASDEMKKLREKFIKEAIDDAQ-LATVQGTK 304
+NG I+ + K+ EE A D +KK++ + K+A DDA+ AT+ G K
Sbjct: 239 YNGSITPPLFVGKICREEPAVDMIKKIQFEIEKKASDDAESKATLAGVK 287
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,133,401
Number of Sequences: 53049
Number of extensions: 542269
Number of successful extensions: 1565
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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