Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_B19
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 186 2e-47
AC024214-2|AAF36076.1| 108|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z81035-6|CAB02739.1| 119|Caenorhabditis elegans Hypothetical pr... 37 0.015
AC024880-8|AAK85514.1| 167|Caenorhabditis elegans Hypothetical ... 36 0.034
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 29 4.0
U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical pr... 29 5.2
U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical pr... 29 5.2
U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical pr... 29 5.2
AC090999-22|AAK26159.1| 481|Caenorhabditis elegans Hypothetical... 28 9.1
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 186 bits (452), Expect = 2e-47
Identities = 91/174 (52%), Positives = 114/174 (65%)
Frame = -3
Query: 693 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXECIYAEFKNTDMRY 514
ASFPP+ D RLK +LL AL+ G+ P E +Y+ ++T+ Y
Sbjct: 136 ASFPPKHLENDETRLKSAQLLLSALRF-GDMPQGTLDPEELAVQIEEKLYSVHRDTNKSY 194
Query: 513 KNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDD 334
VRSR+ NL+D KN LR N GV+ A + A MT EEMAS E++++R+KF KEAI +
Sbjct: 195 SAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSEEMASAEIREMRDKFTKEAILE 254
Query: 333 AQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 172
Q++ QGT ++M KCGKC KKNCTY QLQTRSSDEPMTTFV C ECGNRWKFC
Sbjct: 255 HQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGNRWKFC 308
>AC024214-2|AAF36076.1| 108|Caenorhabditis elegans Hypothetical
protein Y77E11A.6 protein.
Length = 108
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 288 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 178
C C + QLQTRS+DEP T F C N C +RWK
Sbjct: 69 CPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRWK 107
>Z81035-6|CAB02739.1| 119|Caenorhabditis elegans Hypothetical
protein C15H11.8 protein.
Length = 119
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 288 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNEC 193
C KC +Y+ +QTRS+DE T F C +C
Sbjct: 80 CTKCGHSKASYSTMQTRSADEGQTVFYTCLKC 111
>AC024880-8|AAK85514.1| 167|Caenorhabditis elegans Hypothetical
protein Y97E10AR.5 protein.
Length = 167
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 306 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRW 181
KTE +C C K + Q QT+ ++E M + +C +C +RW
Sbjct: 122 KTEEHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVCASQDCQHRW 165
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 402 PEEMASDEMKKLREKFIKEAIDDAQLATVQGTKTEMLKCGKC 277
PE +A+ ++ K + KE D + T +GT+ + L CG C
Sbjct: 78 PEAVATPDVPKAENEKEKEDEADDTILTSKGTEMKGLSCGIC 119
>U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical
protein F26F12.3c protein.
Length = 648
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 435 VISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTY 256
V+SA ++A + +E S+E + R + I DD K +++ KC +CT
Sbjct: 249 VMSAEKMASILRDEAMSNEEPEERFERIDFETDDFDFEDADDEKDPVIEKLKCATCDCTK 308
Query: 255 N 253
N
Sbjct: 309 N 309
>U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical
protein F26F12.3b protein.
Length = 805
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 435 VISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTY 256
V+SA ++A + +E S+E + R + I DD K +++ KC +CT
Sbjct: 406 VMSAEKMASILRDEAMSNEEPEERFERIDFETDDFDFEDADDEKDPVIEKLKCATCDCTK 465
Query: 255 N 253
N
Sbjct: 466 N 466
>U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical
protein F26F12.3a protein.
Length = 890
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 435 VISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTY 256
V+SA ++A + +E S+E + R + I DD K +++ KC +CT
Sbjct: 491 VMSAEKMASILRDEAMSNEEPEERFERIDFETDDFDFEDADDEKDPVIEKLKCATCDCTK 550
Query: 255 N 253
N
Sbjct: 551 N 551
>AC090999-22|AAK26159.1| 481|Caenorhabditis elegans Hypothetical
protein Y82E9BR.17a protein.
Length = 481
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Frame = -1
Query: 218 PHLSFVMNVVIAGNFAKT---------ALNNLERWFKYLL**YIFSIMCFITFTMIWF 72
PHL+ + ++ GNF KT LN +ER+ + Y+ I+C++ + WF
Sbjct: 110 PHLADIKQIL--GNFWKTYSEPRIAEEVLNTIERFCVITMGRYVRKILCYMNVKLDWF 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,860,227
Number of Sequences: 27780
Number of extensions: 290493
Number of successful extensions: 1039
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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