Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_B16
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 200 2e-51
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 200 2e-51
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 200 2e-51
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 200 2e-51
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 200 2e-51
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 200 2e-51
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 179 6e-45
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 122 1e-27
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 58 2e-08
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 31 1.8
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 1.8
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 1.8
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 1.8
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 1.8
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 1.8
X04325-1|CAA27856.1| 283|Homo sapiens protein ( Human liver mRN... 29 9.7
BT019329-1|AAV38136.1| 283|Homo sapiens gap junction protein, b... 29 9.7
BC039198-1|AAH39198.1| 283|Homo sapiens GJB1 protein protein. 29 9.7
BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein. 29 9.7
BC022426-1|AAH22426.1| 283|Homo sapiens gap junction protein, b... 29 9.7
BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein. 29 9.7
BC002805-1|AAH02805.1| 283|Homo sapiens gap junction protein, b... 29 9.7
AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein FL... 29 9.7
AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain con... 29 9.7
AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain con... 29 9.7
AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain con... 29 9.7
AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain con... 29 9.7
AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain con... 29 9.7
AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain con... 29 9.7
AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain con... 29 9.7
AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain con... 29 9.7
AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens ... 29 9.7
AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransfera... 29 9.7
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 200 bits (488), Expect = 2e-51
Identities = 95/148 (64%), Positives = 111/148 (75%)
Frame = -1
Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 90 XKVEGXKAAAWRRPQGKQCHNSTSRXPI 7
KVE A+ RRP KQ H+S + P+
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPL 154
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 200 bits (488), Expect = 2e-51
Identities = 95/148 (64%), Positives = 111/148 (75%)
Frame = -1
Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 90 XKVEGXKAAAWRRPQGKQCHNSTSRXPI 7
KVE A+ RRP KQ H+S + P+
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPL 154
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 200 bits (488), Expect = 2e-51
Identities = 95/148 (64%), Positives = 111/148 (75%)
Frame = -1
Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 90 XKVEGXKAAAWRRPQGKQCHNSTSRXPI 7
KVE A+ RRP KQ H+S + P+
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPL 154
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 200 bits (488), Expect = 2e-51
Identities = 95/148 (64%), Positives = 111/148 (75%)
Frame = -1
Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 90 XKVEGXKAAAWRRPQGKQCHNSTSRXPI 7
KVE A+ RRP KQ H+S + P+
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPL 154
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 200 bits (488), Expect = 2e-51
Identities = 95/148 (64%), Positives = 111/148 (75%)
Frame = -1
Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSIQI 126
Query: 90 XKVEGXKAAAWRRPQGKQCHNSTSRXPI 7
KVE A+ RRP KQ H+S + P+
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPL 154
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 200 bits (488), Expect = 2e-51
Identities = 95/148 (64%), Positives = 111/148 (75%)
Frame = -1
Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 90 XKVEGXKAAAWRRPQGKQCHNSTSRXPI 7
KVE A+ RRP KQ H+S + P+
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPL 154
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 179 bits (435), Expect = 6e-45
Identities = 84/129 (65%), Positives = 98/129 (75%)
Frame = -1
Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
LREY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V
Sbjct: 7 LREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYCGQ 66
Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
KNFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 90 XKVEGXKAA 64
VE A+
Sbjct: 127 MMVEEIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 122 bits (293), Expect = 1e-27
Identities = 55/78 (70%), Positives = 61/78 (78%)
Frame = -1
Query: 240 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIXKVEGXKAAA 61
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI KVE +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 60 WRRPQGKQCHNSTSRXPI 7
RRP KQ H+S + P+
Sbjct: 101 CRRPAVKQFHDSKIKFPL 118
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 58.0 bits (134), Expect = 2e-08
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = -1
Query: 138 RDMGARHRARAHSIQIXKVEGXKAAAWRRPQGKQCHNSTSRXPI 7
RDMGARHRARAHSIQI KVE A+ RRP KQ H+S + P+
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPL 44
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 269 ISLIETISPVVFLNFLSCLRKYQKRDLATIGSGEKILILYKGGLGSFSDGSLRPITSYSL 448
++L S V +N CL D A G +++Y+G S +G L+P T Y
Sbjct: 1874 VNLASVSSGAVRVNLDGCL----STDSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
Query: 449 NLFTPNPGDSVF 484
+ + G SV+
Sbjct: 1930 RVIASHEGGSVY 1941
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 269 ISLIETISPVVFLNFLSCLRKYQKRDLATIGSGEKILILYKGGLGSFSDGSLRPITSYSL 448
++L S V +N CL D A G +++Y+G S +G L+P T Y
Sbjct: 1874 VNLASVSSGAVRVNLDGCL----STDSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
Query: 449 NLFTPNPGDSVF 484
+ + G SV+
Sbjct: 1930 RVIASHEGGSVY 1941
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 269 ISLIETISPVVFLNFLSCLRKYQKRDLATIGSGEKILILYKGGLGSFSDGSLRPITSYSL 448
++L S V +N CL D A G +++Y+G S +G L+P T Y
Sbjct: 1874 VNLASVSSGAVRVNLDGCL----STDSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
Query: 449 NLFTPNPGDSVF 484
+ + G SV+
Sbjct: 1930 RVIASHEGGSVY 1941
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 269 ISLIETISPVVFLNFLSCLRKYQKRDLATIGSGEKILILYKGGLGSFSDGSLRPITSYSL 448
++L S V +N CL D A G +++Y+G S +G L+P T Y
Sbjct: 1874 VNLASVSSGAVRVNLDGCL----STDSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
Query: 449 NLFTPNPGDSVF 484
+ + G SV+
Sbjct: 1930 RVIASHEGGSVY 1941
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 269 ISLIETISPVVFLNFLSCLRKYQKRDLATIGSGEKILILYKGGLGSFSDGSLRPITSYSL 448
++L S V +N CL D A G +++Y+G S +G L+P T Y
Sbjct: 1874 VNLASVSSGAVRVNLDGCL----STDSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
Query: 449 NLFTPNPGDSVF 484
+ + G SV+
Sbjct: 1930 RVIASHEGGSVY 1941
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 269 ISLIETISPVVFLNFLSCLRKYQKRDLATIGSGEKILILYKGGLGSFSDGSLRPITSYSL 448
++L S V +N CL D A G +++Y+G S +G L+P T Y
Sbjct: 1874 VNLASVSSGAVRVNLDGCL----STDSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
Query: 449 NLFTPNPGDSVF 484
+ + G SV+
Sbjct: 1930 RVIASHEGGSVY 1941
>X04325-1|CAA27856.1| 283|Homo sapiens protein ( Human liver mRNA
for gap junction protein. ).
Length = 283
Score = 29.1 bits (62), Expect = 9.7
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +2
Query: 239 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 394
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 395 GLGSFSDGSLRPI 433
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>BT019329-1|AAV38136.1| 283|Homo sapiens gap junction protein, beta
1, 32kDa (connexin 32, Charcot-Marie-Tooth neuropath
protein.
Length = 283
Score = 29.1 bits (62), Expect = 9.7
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +2
Query: 239 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 394
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 395 GLGSFSDGSLRPI 433
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>BC039198-1|AAH39198.1| 283|Homo sapiens GJB1 protein protein.
Length = 283
Score = 29.1 bits (62), Expect = 9.7
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +2
Query: 239 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 394
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 395 GLGSFSDGSLRPI 433
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>BC022426-1|AAH22426.1| 283|Homo sapiens gap junction protein, beta
1, 32kDa protein.
Length = 283
Score = 29.1 bits (62), Expect = 9.7
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +2
Query: 239 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 394
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 395 GLGSFSDGSLRPI 433
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein.
Length = 287
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 76 NGPHLLLRAVRDIEVGEELTICYLDM 101
>BC002805-1|AAH02805.1| 283|Homo sapiens gap junction protein, beta
1, 32kDa protein.
Length = 283
Score = 29.1 bits (62), Expect = 9.7
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +2
Query: 239 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 394
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 395 GLGSFSDGSLRPI 433
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein
FLJ21080 protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21080 fis, clone CAS02449. ).
Length = 369
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 158 NGPHLLLRAVRDIEVGEELTICYLDM 183
>AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransferase
protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 207 SGVHNMYREYRDLSVGGAVTQCYRDM 130
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,590,407
Number of Sequences: 237096
Number of extensions: 1647043
Number of successful extensions: 3253
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3251
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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