Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B16
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   229   2e-60
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   229   2e-60
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   229   2e-60
AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA...    30   1.6  

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  229 bits (560), Expect = 2e-60
 Identities = 109/150 (72%), Positives = 119/150 (79%)
 Frame = -1

Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
           L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV    
Sbjct: 7   LKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQ 66

Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
                    KNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQI
Sbjct: 67  VYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQI 126

Query: 90  XKVEGXKAAAWRRPQGKQCHNSTSRXPIAQ 1
            KV+   AA  RR   KQ H+S  + P+ Q
Sbjct: 127 IKVDSIPAAKTRRVHVKQFHDSKIKFPLVQ 156


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  229 bits (560), Expect = 2e-60
 Identities = 109/150 (72%), Positives = 119/150 (79%)
 Frame = -1

Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
           L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV    
Sbjct: 7   LKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQ 66

Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
                    KNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQI
Sbjct: 67  VYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQI 126

Query: 90  XKVEGXKAAAWRRPQGKQCHNSTSRXPIAQ 1
            KV+   AA  RR   KQ H+S  + P+ Q
Sbjct: 127 IKVDSIPAAKTRRVHVKQFHDSKIKFPLVQ 156


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  229 bits (560), Expect = 2e-60
 Identities = 109/150 (72%), Positives = 119/150 (79%)
 Frame = -1

Query: 450 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 271
           L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV    
Sbjct: 7   LKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQ 66

Query: 270 XXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 91
                    KNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQI
Sbjct: 67  VYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQI 126

Query: 90  XKVEGXKAAAWRRPQGKQCHNSTSRXPIAQ 1
            KV+   AA  RR   KQ H+S  + P+ Q
Sbjct: 127 IKVDSIPAAKTRRVHVKQFHDSKIKFPLVQ 156


>AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA
            protein.
          Length = 2444

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 4    GNWASAGAVVALFALWPAPRSS 69
            G W  AGA V L +LWP P ++
Sbjct: 1569 GGWLLAGAGVVLISLWPVPETA 1590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,160,598
Number of Sequences: 53049
Number of extensions: 502627
Number of successful extensions: 1357
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)