Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_B15
(666 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1 pro... 173 6e-45
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 26 0.93
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 24 3.7
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 24 3.7
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 24 5.0
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 6.5
AY187043-1|AAO39757.1| 171|Anopheles gambiae putative antennal ... 23 6.5
AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative odorant-b... 23 6.5
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 23 8.7
AY146728-1|AAO12088.1| 131|Anopheles gambiae odorant-binding pr... 23 8.7
>AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1
protein protein.
Length = 160
Score = 173 bits (420), Expect = 6e-45
Identities = 83/133 (62%), Positives = 98/133 (73%)
Frame = -1
Query: 666 SXYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXEFLPIYSQAKK 487
S YD+EG G++DA +LG+ LRALN NPT+ I EFLPI+SQ KK
Sbjct: 18 SVYDWEGSGQMDAMDLGNALRALNLNPTIELIGKMGGTQKRGEKKIKFEEFLPIFSQVKK 77
Query: 486 DKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 307
+K+QG +EDFLECLKLYDKNE+G ML AELTH+L ALGE+LDD E+ V KDCMDPEDDD
Sbjct: 78 EKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKDCMDPEDDD 137
Query: 306 GMIPYAAFLKKVM 268
G IPYA FLKK+M
Sbjct: 138 GNIPYAPFLKKMM 150
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 26.2 bits (55), Expect = 0.93
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 375 GEKLDDSEVAEVTKDCMDPEDDDG 304
G K+++ +AEV K +D EDD G
Sbjct: 1250 GLKMENGVIAEVEKSQVDGEDDTG 1273
Score = 23.0 bits (47), Expect = 8.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 342 LQRLHCRQASHLVQEACV*AQRQA*DRFRSCHTASD 449
++RL C + LV+E +R+ DRF H S+
Sbjct: 1783 IKRLSCAEICQLVKERARAKRREDVDRFDLQHADSN 1818
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 24.2 bits (50), Expect = 3.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 87 HVDIPYNXLDTDKPLFYTNNII 22
++DI +N K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 24.2 bits (50), Expect = 3.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 87 HVDIPYNXLDTDKPLFYTNNII 22
++DI +N K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 23.8 bits (49), Expect = 5.0
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 93 PSHVDIPYNXLDTDKPLFYT-NNIIXTVL 10
P+ DI + + K LFYT N I+ TVL
Sbjct: 217 PTETDITFYIIIRRKTLFYTVNLILPTVL 245
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 87 HVDIPYNXLDTDKPLFYTNNII 22
++DI +N K LFYT N+I
Sbjct: 226 YLDITFNITMRRKTLFYTVNLI 247
>AY187043-1|AAO39757.1| 171|Anopheles gambiae putative antennal
carrier protein AP-1 protein.
Length = 171
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 405 AELTHTLLALGEKLDDSEVAEVTKDCMDP 319
AE ++ DD +VT++C+DP
Sbjct: 64 AESFKCVIVKNSTKDDVNKVQVTRECLDP 92
>AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative
odorant-binding protein OBPjj17 protein.
Length = 285
Score = 23.4 bits (48), Expect = 6.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 358 VVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 465
V+K L+ CK +V +L +H + Q + ++IF
Sbjct: 130 VLKALSYCKPKVTQLQGRHVRTDEEMEQCEIAEDIF 165
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 23.0 bits (47), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 105 PARAPSHVDIPYNXLDTDKPLFYTNNII 22
P A + DI +N K LFYT N+I
Sbjct: 233 PCCAEPYPDIFFNITLRRKTLFYTVNLI 260
>AY146728-1|AAO12088.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP21 protein.
Length = 131
Score = 23.0 bits (47), Expect = 8.7
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -1
Query: 411 LGAELTH---TLLALGEKLDDSEVAEVTKDCM 325
LG EL T + LG+ DSE A+ T CM
Sbjct: 35 LGGELPEDFATKMRLGDLTLDSETAKCTIQCM 66
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,205
Number of Sequences: 2352
Number of extensions: 10763
Number of successful extensions: 34
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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