Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B13
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160...    30   2.1  
02_03_0151 - 15759254-15760459                                         29   3.7  
07_03_0244 - 15715047-15715163,15716672-15716824,15718629-157187...    29   4.9  
06_02_0024 - 10714741-10716241,10716774-10717840                       28   8.5  

>02_04_0567 -
           23914330-23914461,23915016-23915136,23915954-23916048,
           23916131-23916301,23917291-23917380,23917636-23918139
          Length = 370

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 212 FNLPIYLRS-QCLRTFRLSPNSPAGTPQSPTPLP 310
           FNLP +LRS +C  TF   P  P   P  P P P
Sbjct: 20  FNLPPWLRSLRCPFTFLCPPPPPPPPPPPPPPPP 53


>02_03_0151 - 15759254-15760459
          Length = 401

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 431 GRLTLTPIRTTREQKEVLTSAEVL*HVQRRRHVPVL*QEAGAAVLAIG 288
           G LT +P   +RE +     A    H +RRRH+P L      A   +G
Sbjct: 26  GELTASPALVSREWRRAAREAHQR-HRRRRRHLPCLVAHVHGAAAGVG 72


>07_03_0244 -
           15715047-15715163,15716672-15716824,15718629-15718748,
           15718830-15719045,15719902-15719968,15720051-15720125,
           15720607-15720698,15721053-15721154,15721642-15721711,
           15721788-15721846,15721947-15722031,15722443-15722520,
           15722627-15722725,15722819-15722910,15725572-15725661,
           15725937-15725995,15727966-15728281,15728627-15728702,
           15729998-15730308,15730577-15730634,15731082-15731092,
           15731247-15731397,15733372-15733778
          Length = 967

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 221 PIYLRSQCLRTFRLSPNSPAGTPQSPTPLPR 313
           P +LR   LR  R +  SPA  P  P+P PR
Sbjct: 10  PTFLREVELRLLRCTLPSPATLPPPPSPPPR 40


>06_02_0024 - 10714741-10716241,10716774-10717840
          Length = 855

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 618 ADEFLPRLCGVSTSKMRSLTFVLLAAILGTALAVGQYYVPRSYYTIDSDGHES 460
           A++   +L   +  K RSL  +LLA +  T         P  Y+ +D DGH++
Sbjct: 352 ANDDREKLLNQALEKARSLV-LLLATLAATITYQAVLDPPGGYWQVDKDGHKA 403


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,856,322
Number of Sequences: 37544
Number of extensions: 407887
Number of successful extensions: 1100
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)