Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B11
         (839 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071623-1|AAL49245.1|  157|Drosophila melanogaster RE67445p pro...   152   7e-37
AE013599-3990|AAF47297.2|  157|Drosophila melanogaster CG2811-PA...   152   7e-37
BT011448-1|AAR99106.1|  167|Drosophila melanogaster RE46349p pro...   128   7e-30
AE013599-3991|AAF47298.1|  167|Drosophila melanogaster CG2803-PA...   128   7e-30
AY060353-1|AAL25392.1|   84|Drosophila melanogaster GH28534p pro...    44   3e-04
AE013599-3992|ABC66047.1|   84|Drosophila melanogaster CG2803-PB...    44   3e-04
AY113380-1|AAM29385.1|  561|Drosophila melanogaster RE02878p pro...    33   0.64 
AE014134-1833|AAF52909.2|  561|Drosophila melanogaster CG4972-PA...    32   0.85 
AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH0241...    31   2.6  
AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB...    31   2.6  
AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA...    31   2.6  
AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB...    30   4.5  
AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA...    30   4.5  
D84314-1|BAA21707.1|  208|Drosophila melanogaster rab6 protein.        29   7.9  
AY060261-1|AAL25300.1|  208|Drosophila melanogaster GH09086p pro...    29   7.9  
AE014134-2164|AAF53168.1|  208|Drosophila melanogaster CG6601-PA...    29   7.9  

>AY071623-1|AAL49245.1|  157|Drosophila melanogaster RE67445p
           protein.
          Length = 157

 Score =  152 bits (368), Expect = 7e-37
 Identities = 68/149 (45%), Positives = 101/149 (67%)
 Frame = -3

Query: 681 KNAMAHKVFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHS 502
           K  MA +VFVYGTLKR EPNH  +T  ENG A F+  G T+ K+PL++ T+YN+PFLL  
Sbjct: 4   KLRMAARVFVYGTLKRGEPNHHWLTKKENGQARFLGRGKTETKFPLVVGTRYNIPFLLAR 63

Query: 501 PGTGYNVKGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDSTVMKCWVYFLKMFKPE 322
           PG G +++GE+YEVD+ MLS LDILED+P+ Y R++  I++  +  ++CW+Y ++ F  +
Sbjct: 64  PGEGNHIEGEVYEVDETMLSKLDILEDYPDYYDREQQTILMEQNETIQCWLYLIRNFPDK 123

Query: 321 LLSKPFLEDYKSEGDHGLRYCERCKRDVN 235
           +L+K  L  Y +  +    Y E+  R V+
Sbjct: 124 MLAKELLISYHNTPER--PYNEKSVRTVS 150


>AE013599-3990|AAF47297.2|  157|Drosophila melanogaster CG2811-PA
           protein.
          Length = 157

 Score =  152 bits (368), Expect = 7e-37
 Identities = 68/149 (45%), Positives = 101/149 (67%)
 Frame = -3

Query: 681 KNAMAHKVFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHS 502
           K  MA +VFVYGTLKR EPNH  +T  ENG A F+  G T+ K+PL++ T+YN+PFLL  
Sbjct: 4   KLRMAARVFVYGTLKRGEPNHHWLTKKENGQARFLGRGKTETKFPLVVGTRYNIPFLLAR 63

Query: 501 PGTGYNVKGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDSTVMKCWVYFLKMFKPE 322
           PG G +++GE+YEVD+ MLS LDILED+P+ Y R++  I++  +  ++CW+Y ++ F  +
Sbjct: 64  PGEGNHIEGEVYEVDETMLSKLDILEDYPDYYDREQQTILMEQNETIQCWLYLIRNFPDK 123

Query: 321 LLSKPFLEDYKSEGDHGLRYCERCKRDVN 235
           +L+K  L  Y +  +    Y E+  R V+
Sbjct: 124 MLAKELLISYHNTPER--PYNEKSVRTVS 150


>BT011448-1|AAR99106.1|  167|Drosophila melanogaster RE46349p
           protein.
          Length = 167

 Score =  128 bits (310), Expect = 7e-30
 Identities = 59/131 (45%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
 Frame = -3

Query: 663 KVFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYN 484
           K+FVYG LK  +P++  + +  NG A F  +  T +K PL+IAT+YN+PFLL+ PG GY 
Sbjct: 13  KLFVYGALKYGQPSNSILASSGNGFAKFWCKATTTQKLPLVIATRYNIPFLLNKPGVGYY 72

Query: 483 VKGEIYEVDDKMLSNLDILEDHPNCYIRDKNDI-VLTDSTVMKCWVYFLKMFKPELLSKP 307
           V GEIYEVDD+ML++LD LED    Y R+ +D+ +      + CWVY L+ +   LLS  
Sbjct: 73  VTGEIYEVDDRMLNSLDNLEDCEEIYTREMHDMNIGVGEGTVPCWVYLLQKYPENLLSLR 132

Query: 306 FLEDYKSEGDH 274
           +L  Y++   H
Sbjct: 133 YLSSYENSTTH 143


>AE013599-3991|AAF47298.1|  167|Drosophila melanogaster CG2803-PA,
           isoform A protein.
          Length = 167

 Score =  128 bits (310), Expect = 7e-30
 Identities = 59/131 (45%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
 Frame = -3

Query: 663 KVFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYN 484
           K+FVYG LK  +P++  + +  NG A F  +  T +K PL+IAT+YN+PFLL+ PG GY 
Sbjct: 13  KLFVYGALKYGQPSNSILASSGNGFAKFWCKATTTQKLPLVIATRYNIPFLLNKPGVGYY 72

Query: 483 VKGEIYEVDDKMLSNLDILEDHPNCYIRDKNDI-VLTDSTVMKCWVYFLKMFKPELLSKP 307
           V GEIYEVDD+ML++LD LED    Y R+ +D+ +      + CWVY L+ +   LLS  
Sbjct: 73  VTGEIYEVDDRMLNSLDNLEDCEEIYTREMHDMNIGVGEGTVPCWVYLLQKYPENLLSLR 132

Query: 306 FLEDYKSEGDH 274
           +L  Y++   H
Sbjct: 133 YLSSYENSTTH 143


>AY060353-1|AAL25392.1|   84|Drosophila melanogaster GH28534p
           protein.
          Length = 84

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -3

Query: 450 MLSNLDILEDHPNCYIRDKNDIVL-TDSTVMKCWVYFLKMFKPELLSKPFLEDYKSEGDH 274
           ML++LD LED    Y R+ +D+ +      + CWVY L+ +   LLS  +L  Y++   H
Sbjct: 1   MLNSLDNLEDCEEIYTREMHDMNIGVGEGTVPCWVYLLQKYPENLLSLRYLSSYENSTTH 60


>AE013599-3992|ABC66047.1|   84|Drosophila melanogaster CG2803-PB,
           isoform B protein.
          Length = 84

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -3

Query: 450 MLSNLDILEDHPNCYIRDKNDIVL-TDSTVMKCWVYFLKMFKPELLSKPFLEDYKSEGDH 274
           ML++LD LED    Y R+ +D+ +      + CWVY L+ +   LLS  +L  Y++   H
Sbjct: 1   MLNSLDNLEDCEEIYTREMHDMNIGVGEGTVPCWVYLLQKYPENLLSLRYLSSYENSTTH 60


>AY113380-1|AAM29385.1|  561|Drosophila melanogaster RE02878p
           protein.
          Length = 561

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -3

Query: 606 NPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKG--EIYEVDDKMLSNLD 433
           N +  V   + E  +K  Y   +A KY + FLL   G   N +G  +  EVDD  L N++
Sbjct: 241 NADAAVLLVLMELFSKLHYTSSMAPKYRLRFLLSDAGVLLNFQGSKKWLEVDDNALQNVE 300

Query: 432 IL 427
            +
Sbjct: 301 FM 302


>AE014134-1833|AAF52909.2|  561|Drosophila melanogaster CG4972-PA
           protein.
          Length = 561

 Score = 32.3 bits (70), Expect = 0.85
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -3

Query: 606 NPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKG--EIYEVDDKMLSNLD 433
           N +  V   + E  +K  Y   +A KY + FLL   G   N +G  +  EVDD  L N++
Sbjct: 241 NADAAVLLVLMELFSKLHYTSSMAPKYRLRFLLSDAGVLLNFQGSKKWLEVDDNALQNVE 300

Query: 432 IL 427
            +
Sbjct: 301 FV 302


>AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH02419
           protein.
          Length = 1080

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = -3

Query: 444 SNLDILEDHPNCYIRDKNDIVLTDSTVMKCWVYFLK----MFKPELLSKPFLEDYKSEGD 277
           SN+++L   P+CY++  +D  +T  T    +  +       +     S+P L+ ++ +G+
Sbjct: 330 SNINLLYSTPSCYLKSLHDAGITWPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGN 389

Query: 276 HGLRYCER 253
           H L+ C++
Sbjct: 390 HFLQVCKQ 397


>AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB,
           isoform B protein.
          Length = 1080

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = -3

Query: 444 SNLDILEDHPNCYIRDKNDIVLTDSTVMKCWVYFLK----MFKPELLSKPFLEDYKSEGD 277
           SN+++L   P+CY++  +D  +T  T    +  +       +     S+P L+ ++ +G+
Sbjct: 330 SNINLLYSTPSCYLKSLHDAGITWPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGN 389

Query: 276 HGLRYCER 253
           H L+ C++
Sbjct: 390 HFLQVCKQ 397


>AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA,
           isoform A protein.
          Length = 1080

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = -3

Query: 444 SNLDILEDHPNCYIRDKNDIVLTDSTVMKCWVYFLK----MFKPELLSKPFLEDYKSEGD 277
           SN+++L   P+CY++  +D  +T  T    +  +       +     S+P L+ ++ +G+
Sbjct: 330 SNINLLYSTPSCYLKSLHDAGITWPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGN 389

Query: 276 HGLRYCER 253
           H L+ C++
Sbjct: 390 HFLQVCKQ 397


>AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB,
            isoform B protein.
          Length = 3966

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -3

Query: 327  PELLSKPFLEDYKSEGDHGLRYCERCKR-DVNFK---LKLAVRDNCAYL*LS*LRMSRFQ 160
            P L++   ++ Y S  +  L+   +    DVN     +KLA+ D C Y   +  R +R  
Sbjct: 2428 PSLVNCCTIDWYDSWPEEALQMIAKMSLVDVNVPSEDIKLAIMDTCQYFHTTAARSTRAF 2487

Query: 159  CFMSGRILY 133
            C M+GR +Y
Sbjct: 2488 CQMTGRHIY 2496


>AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA,
            isoform A protein.
          Length = 3868

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -3

Query: 327  PELLSKPFLEDYKSEGDHGLRYCERCKR-DVNFK---LKLAVRDNCAYL*LS*LRMSRFQ 160
            P L++   ++ Y S  +  L+   +    DVN     +KLA+ D C Y   +  R +R  
Sbjct: 2428 PSLVNCCTIDWYDSWPEEALQMIAKMSLVDVNVPSEDIKLAIMDTCQYFHTTAARSTRAF 2487

Query: 159  CFMSGRILY 133
            C M+GR +Y
Sbjct: 2488 CQMTGRHIY 2496


>D84314-1|BAA21707.1|  208|Drosophila melanogaster rab6 protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -3

Query: 537 ATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDS 370
           A + NV F+  S   GYNVK +++      L  +D  E+ P+    D  ++VL DS
Sbjct: 144 AKELNVMFIETSAKAGYNVK-QLFRRVAAALPGMDSTENKPS---EDMQEVVLKDS 195


>AY060261-1|AAL25300.1|  208|Drosophila melanogaster GH09086p
           protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -3

Query: 537 ATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDS 370
           A + NV F+  S   GYNVK +++      L  +D  E+ P+    D  ++VL DS
Sbjct: 144 AKELNVMFIETSAKAGYNVK-QLFRRVAAALPGMDSTENKPS---EDMQEVVLKDS 195


>AE014134-2164|AAF53168.1|  208|Drosophila melanogaster CG6601-PA
           protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -3

Query: 537 ATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDS 370
           A + NV F+  S   GYNVK +++      L  +D  E+ P+    D  ++VL DS
Sbjct: 144 AKELNVMFIETSAKAGYNVK-QLFRRVAAALPGMDSTENKPS---EDMQEVVLKDS 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,944,341
Number of Sequences: 53049
Number of extensions: 710690
Number of successful extensions: 1393
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)