Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B11
         (839 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.50 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.50 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   4.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.6  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   8.1  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = -3

Query: 603 PENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILE 424
           PE+ + TF+          L   + Y     LH       +  E +E D K+  NL++L 
Sbjct: 304 PESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRDLVLMSEQFEADYKLTRNLELLT 363

Query: 423 D 421
           D
Sbjct: 364 D 364


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = -3

Query: 603 PENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILE 424
           PE+ + TF+          L   + Y     LH       +  E +E D K+  NL++L 
Sbjct: 304 PESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRDLVLMSEQFEADYKLTRNLELLT 363

Query: 423 D 421
           D
Sbjct: 364 D 364


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 525 NVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDI 430
           NV  +L    T YN+   + ++D   L++LDI
Sbjct: 505 NVTNILSMDNTQYNLDLSLPQLDSTELADLDI 536


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +2

Query: 122 YPHQ-YNIRPDMKH*NLDIRSQLNH 193
           Y HQ Y  +PD+ + N D+R ++ +
Sbjct: 190 YFHQFYKQQPDLNYRNSDVREEMKN 214



 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -3

Query: 681 KNAMAHKVFVYGTLKRNEPNHGTMTNPENGVATFIAEGMT 562
           KNA+ ++V+    +  N    G +   ++ ++ FI  G+T
Sbjct: 26  KNAIFYQVYPRSFMDSNSDGIGDLKGIKDKLSHFIESGIT 65


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/55 (20%), Positives = 27/55 (49%)
 Frame = -2

Query: 694 NTLQQKCNGAQSIRLWYFKKK*TESRHHDEPRERGSDFYS*RNDKRKVSVDHSNK 530
           N+L+ + +G Q     Y +++      + E RE+   +    N+K K+  + +++
Sbjct: 215 NSLRNRTHGFQHTSSRYSRERSCSRDRNREYREKDRRYEKLHNEKEKLLEERTSR 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,089
Number of Sequences: 438
Number of extensions: 4535
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)