Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B06
         (733 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA...    29   4.9  
AY061207-1|AAL28755.1|  707|Drosophila melanogaster LD15658p pro...    29   6.5  
AE014134-3600|EAA46022.2|  714|Drosophila melanogaster CG17490-P...    29   6.5  

>AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA
           protein.
          Length = 1173

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +2

Query: 95  HSLAIMLSSLTER*TSQGRCMELKIRVNNTIRGLKQLIYRYNQL 226
           HS A  L++LT+   S  R   L IRV   +  LK+L   +NQL
Sbjct: 363 HSFAT-LNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQL 405


>AY061207-1|AAL28755.1|  707|Drosophila melanogaster LD15658p
           protein.
          Length = 707

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -2

Query: 732 DSTFXDFN--LICVKAWSFKFIKLADAKAFMSCTLAALTLTNWFSLEML 592
           DST  D+N  L+C+ A   KFIKL   +      L + ++  W++  +L
Sbjct: 227 DSTGPDYNIELLCIYAAHVKFIKLLPMENLCLIFLGSGSIDMWYTSRLL 275


>AE014134-3600|EAA46022.2|  714|Drosophila melanogaster CG17490-PB,
           isoform B protein.
          Length = 714

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -2

Query: 732 DSTFXDFN--LICVKAWSFKFIKLADAKAFMSCTLAALTLTNWFSLEML 592
           DST  D+N  L+C+ A   KFIKL   +      L + ++  W++  +L
Sbjct: 234 DSTGPDYNIELLCIYAAHVKFIKLLPMENLCLIFLGSGSIDMWYTSRLL 282


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,130,324
Number of Sequences: 53049
Number of extensions: 485245
Number of successful extensions: 653
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)