Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_B03
         (893 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058594-1|AAL13823.1|  619|Drosophila melanogaster LD28822p pro...    29   8.6  
AF076432-1|AAC78845.1|  114|Drosophila melanogaster myotubularin...    29   8.6  
AE014134-1025|AAF52327.1|  619|Drosophila melanogaster CG9115-PA...    29   8.6  

>AY058594-1|AAL13823.1|  619|Drosophila melanogaster LD28822p
           protein.
          Length = 619

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 68  KHFKSPLFHHINPHLQHQNXILLPSFTHFIHLSLK 172
           KH  + L+ HIN  L      L PSFTH   L L+
Sbjct: 514 KHKTTSLWTHINSSLDQYLNPLFPSFTHGAELVLR 548


>AF076432-1|AAC78845.1|  114|Drosophila melanogaster myotubularin
           related protein 1 protein.
          Length = 114

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 68  KHFKSPLFHHINPHLQHQNXILLPSFTHFIHLSLK 172
           KH  + L+ HIN  L      L PSFTH   L L+
Sbjct: 77  KHKTTSLWTHINSSLDQYLNPLFPSFTHGAELVLR 111


>AE014134-1025|AAF52327.1|  619|Drosophila melanogaster CG9115-PA
           protein.
          Length = 619

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 68  KHFKSPLFHHINPHLQHQNXILLPSFTHFIHLSLK 172
           KH  + L+ HIN  L      L PSFTH   L L+
Sbjct: 514 KHKTTSLWTHINSSLDQYLNPLFPSFTHGAELVLR 548


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,697,867
Number of Sequences: 53049
Number of extensions: 514406
Number of successful extensions: 913
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)