Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_A18
         (801 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    26   0.35 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.5  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   5.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.8  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              22   7.6  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              22   7.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.6  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 626 GTFYTIQCYVNVQKQRIIEIHKILNRREVTQQEI 727
           GT   +Q  + V+ ++I+E+  +L RR+   QE+
Sbjct: 2   GTLRELQELLRVKDEKIVELEALLCRRDAEIQEL 35


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -2

Query: 395 TCTDRSSPRG--ANKKIVNVVTSCELTNNRLDVDSKCTVLFST 273
           T  D+S  +G  A    +   T CELT+  + + S  T    T
Sbjct: 776 TMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQT 818


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -2

Query: 395 TCTDRSSPRG--ANKKIVNVVTSCELTNNRLDVDSKCTVLFST 273
           T  D+S  +G  A    +   T CELT+  + + S  T    T
Sbjct: 866 TMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQT 908


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 476 SHNDYSGTYNIIYIFLHNK*ISDLFNRNCSINV 574
           ++N+Y   YN  Y + +N     L+ +N  IN+
Sbjct: 92  NNNNYKYNYNNKYNYNNNNYNKKLYYKNYIINI 124


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -3

Query: 700 IQNFVN-LNYSLFLNIHITLDG 638
           + +++N LNYS F+N+    DG
Sbjct: 125 LNDYINRLNYSAFVNLTAYYDG 146


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -1

Query: 603 INFLSVCIAATFIEQFLLNKSLIYLLCK 520
           I+ + VC+ A  +E+F +    +  +C+
Sbjct: 7   ISAICVCVGALTLEEFQIGLRAVVPICR 34


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +1

Query: 592 EKINLGQLTPQRNFLHHPMLCECSKTKNN*DSQNF 696
           + + + + TP+R     P+  EC   +NN + + +
Sbjct: 18  DNVTMPETTPRRKKNKKPLPTECVFCRNNGEEEAY 52


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 101 IPKYLYITYNANNFEVSV 48
           IP+ LY+T+ ++N ++ V
Sbjct: 805 IPRILYLTWYSSNGDIKV 822


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,866
Number of Sequences: 438
Number of extensions: 4800
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)