Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_A16
(742 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011758-1|AAH11758.2| 475|Homo sapiens prolyl-tRNA synthetase ... 175 2e-43
BC007956-1|AAH07956.2| 475|Homo sapiens prolyl-tRNA synthetase ... 175 2e-43
AL139244-7|CAI18996.1| 475|Homo sapiens prolyl-tRNA synthetase ... 175 2e-43
AK025585-1|BAB15178.1| 402|Homo sapiens protein ( Homo sapiens ... 175 2e-43
AY040874-1|AAK74139.1| 256|Homo sapiens C21orf57 isoform B prot... 34 0.47
AY040873-1|AAK74138.1| 299|Homo sapiens C21orf57 isoform A prot... 34 0.47
AY253917-1|AAP69949.1| 721|Homo sapiens TRIM9-like protein TNL ... 34 0.62
AL109810-3|CAI19161.1| 721|Homo sapiens tripartite motif-contai... 34 0.62
AL109810-2|CAI19160.1| 746|Homo sapiens tripartite motif-contai... 34 0.62
AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens ... 34 0.62
BC021215-1|AAH21215.1| 442|Homo sapiens chromosome 5 open readi... 31 4.3
AK002055-1|BAA92060.1| 442|Homo sapiens protein ( Homo sapiens ... 31 4.3
AK075378-1|BAC11579.1| 194|Homo sapiens protein ( Homo sapiens ... 31 5.7
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 30 7.6
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 30 7.6
>BC011758-1|AAH11758.2| 475|Homo sapiens prolyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 475
Score = 175 bits (425), Expect = 2e-43
Identities = 94/229 (41%), Positives = 124/229 (54%), Gaps = 4/229 (1%)
Frame = -1
Query: 742 YGRMATAYEHLFRALHLKVHKVEAPSGDMGGSFSHEWQLAATSGEDQIKVCPSCSHAA-- 569
Y + AY LF L L KV+A G +GG+ SHE+QL GED++ +CP CS +A
Sbjct: 223 YSLVCDAYCSLFNKLGLPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPRCSFSANM 282
Query: 568 -LLDHEGARCQSCGKDAEILQSIEVGHTFILGTKYSEALEATYCPPSGPPLPIIMSCYGI 392
LD C +C + IEVGHTF LGTKYS A + G P M CYG+
Sbjct: 283 ETLDLSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGL 342
Query: 391 GITRXXXXXXXXXXXXXXLRWPKAIAPYSAIIIGPKEGSKEWNDHGMDQVKLVYDAL-NS 215
G+TR +RWP +APY A +I PK+GSKE + + +YD + +
Sbjct: 343 GVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKE--QAASELIGQLYDHITEA 400
Query: 214 VPALRSDVLVDDRHGLTIGKRLLMADKMGYPIVIACGKESSSNPPRYEM 68
VP L +VL+DDR LTIG RL A+K GYP VI GK + +P +E+
Sbjct: 401 VPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDPAHFEV 449
>BC007956-1|AAH07956.2| 475|Homo sapiens prolyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 475
Score = 175 bits (425), Expect = 2e-43
Identities = 94/229 (41%), Positives = 124/229 (54%), Gaps = 4/229 (1%)
Frame = -1
Query: 742 YGRMATAYEHLFRALHLKVHKVEAPSGDMGGSFSHEWQLAATSGEDQIKVCPSCSHAA-- 569
Y + AY LF L L KV+A G +GG+ SHE+QL GED++ +CP CS +A
Sbjct: 223 YSLVCDAYCSLFNKLGLPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPRCSFSANM 282
Query: 568 -LLDHEGARCQSCGKDAEILQSIEVGHTFILGTKYSEALEATYCPPSGPPLPIIMSCYGI 392
LD C +C + IEVGHTF LGTKYS A + G P M CYG+
Sbjct: 283 ETLDLSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGL 342
Query: 391 GITRXXXXXXXXXXXXXXLRWPKAIAPYSAIIIGPKEGSKEWNDHGMDQVKLVYDAL-NS 215
G+TR +RWP +APY A +I PK+GSKE + + +YD + +
Sbjct: 343 GVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKE--QAASELIGQLYDHITEA 400
Query: 214 VPALRSDVLVDDRHGLTIGKRLLMADKMGYPIVIACGKESSSNPPRYEM 68
VP L +VL+DDR LTIG RL A+K GYP VI GK + +P +E+
Sbjct: 401 VPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDPAHFEV 449
>AL139244-7|CAI18996.1| 475|Homo sapiens prolyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 475
Score = 175 bits (425), Expect = 2e-43
Identities = 94/229 (41%), Positives = 124/229 (54%), Gaps = 4/229 (1%)
Frame = -1
Query: 742 YGRMATAYEHLFRALHLKVHKVEAPSGDMGGSFSHEWQLAATSGEDQIKVCPSCSHAA-- 569
Y + AY LF L L KV+A G +GG+ SHE+QL GED++ +CP CS +A
Sbjct: 223 YSLVCDAYCSLFNKLGLPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPRCSFSANM 282
Query: 568 -LLDHEGARCQSCGKDAEILQSIEVGHTFILGTKYSEALEATYCPPSGPPLPIIMSCYGI 392
LD C +C + IEVGHTF LGTKYS A + G P M CYG+
Sbjct: 283 ETLDLSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGL 342
Query: 391 GITRXXXXXXXXXXXXXXLRWPKAIAPYSAIIIGPKEGSKEWNDHGMDQVKLVYDAL-NS 215
G+TR +RWP +APY A +I PK+GSKE + + +YD + +
Sbjct: 343 GVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKE--QAASELIGQLYDHITEA 400
Query: 214 VPALRSDVLVDDRHGLTIGKRLLMADKMGYPIVIACGKESSSNPPRYEM 68
VP L +VL+DDR LTIG RL A+K GYP VI GK + +P +E+
Sbjct: 401 VPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDPAHFEV 449
>AK025585-1|BAB15178.1| 402|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21932 fis, clone HEP04318. ).
Length = 402
Score = 175 bits (425), Expect = 2e-43
Identities = 94/229 (41%), Positives = 124/229 (54%), Gaps = 4/229 (1%)
Frame = -1
Query: 742 YGRMATAYEHLFRALHLKVHKVEAPSGDMGGSFSHEWQLAATSGEDQIKVCPSCSHAA-- 569
Y + AY LF L L KV+A G +GG+ SHE+QL GED++ +CP CS +A
Sbjct: 150 YSLVCDAYCSLFNKLGLPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPRCSFSANM 209
Query: 568 -LLDHEGARCQSCGKDAEILQSIEVGHTFILGTKYSEALEATYCPPSGPPLPIIMSCYGI 392
LD C +C + IEVGHTF LGTKYS A + G P M CYG+
Sbjct: 210 ETLDLSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGL 269
Query: 391 GITRXXXXXXXXXXXXXXLRWPKAIAPYSAIIIGPKEGSKEWNDHGMDQVKLVYDAL-NS 215
G+TR +RWP +APY A +I PK+GSKE + + +YD + +
Sbjct: 270 GVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKE--QAASELIGQLYDHITEA 327
Query: 214 VPALRSDVLVDDRHGLTIGKRLLMADKMGYPIVIACGKESSSNPPRYEM 68
VP L +VL+DDR LTIG RL A+K GYP VI GK + +P +E+
Sbjct: 328 VPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDPAHFEV 376
>AY040874-1|AAK74139.1| 256|Homo sapiens C21orf57 isoform B protein
protein.
Length = 256
Score = 34.3 bits (75), Expect = 0.47
Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 415 WAGGAPRGGSTSPPEPHCTL-CPG*TCDRPLYFARFPRPSHSSGISLPHGPTAPRASRTD 591
W G PR T PP C L CP P +R P P ++ L +PRA T
Sbjct: 29 WVCGRPRPQRTRPPTLTCPLSCPS-PIPAPSLPSRCPSPHPAASARL-----SPRAPPTR 82
Query: 592 TLLSGLRQRSPRAATRVRSFLP 657
L SG RS R+A R+ SF P
Sbjct: 83 PLFSG--NRSFRSA-RLESFWP 101
>AY040873-1|AAK74138.1| 299|Homo sapiens C21orf57 isoform A protein
protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.47
Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 415 WAGGAPRGGSTSPPEPHCTL-CPG*TCDRPLYFARFPRPSHSSGISLPHGPTAPRASRTD 591
W G PR T PP C L CP P +R P P ++ L +PRA T
Sbjct: 29 WVCGRPRPQRTRPPTLTCPLSCPS-PIPAPSLPSRCPSPHPAASARL-----SPRAPPTR 82
Query: 592 TLLSGLRQRSPRAATRVRSFLP 657
L SG RS R+A R+ SF P
Sbjct: 83 PLFSG--NRSFRSA-RLESFWP 101
>AY253917-1|AAP69949.1| 721|Homo sapiens TRIM9-like protein TNL
protein.
Length = 721
Score = 33.9 bits (74), Expect = 0.62
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = -1
Query: 679 VEAPSGDMGGSFSHEWQLAATSGEDQIKVCPSCSHAALLDHEGARCQSCGKDAE-ILQSI 503
V AP G + + +S I CP C +A LDH G R + E I+Q
Sbjct: 91 VPAPPGSSAAAARGAACSSLSSSSSSI-TCPQCHRSASLDHRGLRGFQRNRLLEAIVQRY 149
Query: 502 EVGHTFILGTKYSEALEATYCPPSGPPLPIIMSC 401
+ G + GT + A+ PP P C
Sbjct: 150 QQGRGAVPGTSAAAAVAICQLCDRTPPEPAATLC 183
>AL109810-3|CAI19161.1| 721|Homo sapiens tripartite
motif-containing 67 protein.
Length = 721
Score = 33.9 bits (74), Expect = 0.62
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = -1
Query: 679 VEAPSGDMGGSFSHEWQLAATSGEDQIKVCPSCSHAALLDHEGARCQSCGKDAE-ILQSI 503
V AP G + + +S I CP C +A LDH G R + E I+Q
Sbjct: 91 VPAPPGSSAAAARGAACSSLSSSSSSI-TCPQCHRSASLDHRGLRGFQRNRLLEAIVQRY 149
Query: 502 EVGHTFILGTKYSEALEATYCPPSGPPLPIIMSC 401
+ G + GT + A+ PP P C
Sbjct: 150 QQGRGAVPGTSAAAAVAICQLCDRTPPEPAATLC 183
>AL109810-2|CAI19160.1| 746|Homo sapiens tripartite
motif-containing 67 protein.
Length = 746
Score = 33.9 bits (74), Expect = 0.62
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = -1
Query: 679 VEAPSGDMGGSFSHEWQLAATSGEDQIKVCPSCSHAALLDHEGARCQSCGKDAE-ILQSI 503
V AP G + + +S I CP C +A LDH G R + E I+Q
Sbjct: 131 VPAPPGSSAAAARGAACSSLSSSSSSI-TCPQCHRSASLDHRGLRGFQRNRLLEAIVQRY 189
Query: 502 EVGHTFILGTKYSEALEATYCPPSGPPLPIIMSC 401
+ G + GT + A+ PP P C
Sbjct: 190 QQGRGAVPGTSAAAAVAICQLCDRTPPEPAATLC 223
>AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens
cDNA FLJ44831 fis, clone BRACE3047482, moderately
similar to Homo sapiens tripartite motif-containing 9
(TRIM9). ).
Length = 756
Score = 33.9 bits (74), Expect = 0.62
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = -1
Query: 679 VEAPSGDMGGSFSHEWQLAATSGEDQIKVCPSCSHAALLDHEGARCQSCGKDAE-ILQSI 503
V AP G + + +S I CP C +A LDH G R + E I+Q
Sbjct: 131 VPAPPGSSAAAARGAACSSLSSSSSSI-TCPQCHRSASLDHRGLRGFQRNRLLEAIVQRY 189
Query: 502 EVGHTFILGTKYSEALEATYCPPSGPPLPIIMSC 401
+ G + GT + A+ PP P C
Sbjct: 190 QQGRGAVPGTSAAAAVAICQLCDRTPPEPAATLC 223
>BC021215-1|AAH21215.1| 442|Homo sapiens chromosome 5 open reading
frame 22 protein.
Length = 442
Score = 31.1 bits (67), Expect = 4.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -1
Query: 622 ATSGEDQIKVCPSCSHAALLDHEGARCQSCGKDAEILQSIEVGHTFIL 479
AT DQ + PSCS ++ E CQ+ EIL+ ++ G F+L
Sbjct: 207 ATQRSDQTCLEPSCSCSS----ENQECQTAASTGEILEILKKGKAFVL 250
>AK002055-1|BAA92060.1| 442|Homo sapiens protein ( Homo sapiens
cDNA FLJ11193 fis, clone PLACE1007621. ).
Length = 442
Score = 31.1 bits (67), Expect = 4.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -1
Query: 622 ATSGEDQIKVCPSCSHAALLDHEGARCQSCGKDAEILQSIEVGHTFIL 479
AT DQ + PSCS ++ E CQ+ EIL+ ++ G F+L
Sbjct: 207 ATQRSDQTCLEPSCSCSS----ENQECQTAASTGEILEILKKGKAFVL 250
>AK075378-1|BAC11579.1| 194|Homo sapiens protein ( Homo sapiens
cDNA PSEC0068 fis, clone NT2RP2001270. ).
Length = 194
Score = 30.7 bits (66), Expect = 5.7
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 586 TDTLLSGLRQRSPRAATRVRSFLPYRPTELRLCALSS 696
TD + SG R+PRA V +P++ ELRLC++S+
Sbjct: 154 TDYVSSGPSVRNPRARVVVLR-VPFKEAELRLCSVST 189
>AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activated
cyclic nucleotide-gated channel hHCN2 protein.
Length = 889
Score = 30.3 bits (65), Expect = 7.6
Identities = 26/75 (34%), Positives = 30/75 (40%)
Frame = +1
Query: 511 ARFPRPSHSSGISLPHGPTAPRASRTDTLLSGLRQRSPRAATRVRSFLPYRPTELRLCAL 690
+R RP +S SLPHG P AS S R R P A R + P R A
Sbjct: 814 SRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLR-PTPAARAAAPSPDRRDSASPGAA 872
Query: 691 SSVGRGIDARXRLPS 735
+ AR RL S
Sbjct: 873 GGLDPQDSARSRLSS 887
>AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activated
cation channel HCN2 protein.
Length = 889
Score = 30.3 bits (65), Expect = 7.6
Identities = 26/75 (34%), Positives = 30/75 (40%)
Frame = +1
Query: 511 ARFPRPSHSSGISLPHGPTAPRASRTDTLLSGLRQRSPRAATRVRSFLPYRPTELRLCAL 690
+R RP +S SLPHG P AS S R R P A R + P R A
Sbjct: 814 SRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLR-PTPAARAAAPSPDRRDSASPGAA 872
Query: 691 SSVGRGIDARXRLPS 735
+ AR RL S
Sbjct: 873 GGLDPQDSARSRLSS 887
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,139,814
Number of Sequences: 237096
Number of extensions: 2946205
Number of successful extensions: 9249
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9235
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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