Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_A10
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-40|CAN99706.1| 329|Caenorhabditis elegans Hypothetical... 150 9e-37
AL132949-39|CAB61094.1| 295|Caenorhabditis elegans Hypothetical... 150 9e-37
Z73423-2|CAA97774.1| 290|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical pr... 33 0.13
AL117195-27|CAE18006.1| 243|Caenorhabditis elegans Hypothetical... 32 0.29
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 31 0.67
U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activati... 31 0.89
AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase activa... 31 0.89
AL033514-16|CAA22103.2| 465|Caenorhabditis elegans Hypothetical... 30 1.2
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 29 3.6
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 29 3.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.6
Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical p... 28 6.3
Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.3
Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical p... 28 6.3
Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical p... 28 6.3
X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein. 28 6.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 6.3
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 28 6.3
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 6.3
AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical ... 28 6.3
AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical ... 28 6.3
AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical ... 28 6.3
AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical ... 28 6.3
AF125459-11|AAD12842.2| 315|Caenorhabditis elegans Serpentine r... 28 6.3
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 6.3
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 6.3
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 6.3
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 6.3
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 28 6.3
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 6.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 6.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 6.3
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 6.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 6.3
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 6.3
Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical pr... 27 8.3
AY661556-1|AAV70493.1| 714|Caenorhabditis elegans acetylcholine... 27 8.3
AF078786-4|AAC26944.4| 714|Caenorhabditis elegans Sodium:neurot... 27 8.3
AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical ... 27 8.3
>AL132949-40|CAN99706.1| 329|Caenorhabditis elegans Hypothetical
protein Y53F4B.39b protein.
Length = 329
Score = 150 bits (363), Expect = 9e-37
Identities = 74/149 (49%), Positives = 99/149 (66%)
Frame = -3
Query: 526 WLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYMK 347
++ DG E+ V+GAT+K+ TPGHT DH L EE LFSGDCILGEGT VFEDL+ YM
Sbjct: 153 YVDDGFEVAVDGATLKLIATPGHTADHFSLWLQEERALFSGDCILGEGTTVFEDLHDYMT 212
Query: 346 SLQKILDLKPNIIYPGHGNIVKEPVEKIEYYIAHRNQREEQILEALKTNSDKNLNEMDLV 167
SLQKI DL IYPGHG ++ + VEK++ YI HR +RE +I++ LK + + + MD+
Sbjct: 213 SLQKIKDLNATRIYPGHGPVIDKVVEKVDEYIEHRMKREREIIKVLKEHEE--ITSMDVT 270
Query: 166 KIIYTETPEHLWPAAAYNVNHHLTKLVKE 80
+Y ++P + AA NV L KL K+
Sbjct: 271 NQVYADSPWAVRLAALNNVKLVLKKLCKD 299
>AL132949-39|CAB61094.1| 295|Caenorhabditis elegans Hypothetical
protein Y53F4B.39a protein.
Length = 295
Score = 150 bits (363), Expect = 9e-37
Identities = 74/149 (49%), Positives = 99/149 (66%)
Frame = -3
Query: 526 WLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYMK 347
++ DG E+ V+GAT+K+ TPGHT DH L EE LFSGDCILGEGT VFEDL+ YM
Sbjct: 119 YVDDGFEVAVDGATLKLIATPGHTADHFSLWLQEERALFSGDCILGEGTTVFEDLHDYMT 178
Query: 346 SLQKILDLKPNIIYPGHGNIVKEPVEKIEYYIAHRNQREEQILEALKTNSDKNLNEMDLV 167
SLQKI DL IYPGHG ++ + VEK++ YI HR +RE +I++ LK + + + MD+
Sbjct: 179 SLQKIKDLNATRIYPGHGPVIDKVVEKVDEYIEHRMKREREIIKVLKEHEE--ITSMDVT 236
Query: 166 KIIYTETPEHLWPAAAYNVNHHLTKLVKE 80
+Y ++P + AA NV L KL K+
Sbjct: 237 NQVYADSPWAVRLAALNNVKLVLKKLCKD 265
>Z73423-2|CAA97774.1| 290|Caenorhabditis elegans Hypothetical
protein C03A3.3 protein.
Length = 290
Score = 35.5 bits (78), Expect = 0.031
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Frame = -3
Query: 526 WLRDGQEIKVEGAT-----VKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDL 362
WL DG +I + + V+V TPGHT D IVL N LF GD +F
Sbjct: 129 WLNDGDKIILGDESHLMNIVQVMWTPGHTPDSIVLWYPYANRLFVGDLFYRFDDIMFTYQ 188
Query: 361 YT----YMKSLQKIL 329
YT Y S++ IL
Sbjct: 189 YTDIRQYENSVRSIL 203
>Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical
protein C33A12.7 protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = -3
Query: 529 EWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENI--LFSGDCIL 392
+++ DG+ I++ G ++V TPGHT LT +E ++ F+GD +L
Sbjct: 98 KYVSDGEIIEIGGLKLEVRETPGHTNG--CLTYVEHSLRSAFTGDALL 143
>AL117195-27|CAE18006.1| 243|Caenorhabditis elegans Hypothetical
protein Y57A10A.35 protein.
Length = 243
Score = 32.3 bits (70), Expect = 0.29
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 100 SGDLHYMQLLATSVPVSRCILFSLNPFHLDFYQNLFSKL---LIFVLLFDFCELYNIQFF 270
S DL Y L A S+ ++RC++ L P HL+ +L L + VLL FC + I F
Sbjct: 46 SNDLVYPFLSAFSLYIARCLVSHLTPAHLNPAISLLQWLRNEIPLVLLITFCFVQLIGFL 105
Query: 271 QRVPL 285
V L
Sbjct: 106 FGVTL 110
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 553 ELPASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAV 374
E + P++ +E K E + + P HT D IV E I+F G +L +GT +
Sbjct: 150 EETVAAPLDSAAPVEEHKEESHSSEHTEAPAHTEDSIVQADPEARIVFQG--VLADGTQI 207
Query: 373 FE 368
E
Sbjct: 208 IE 209
>U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activating
protein familyprotein 1 protein.
Length = 629
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 442 VLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLKPNI--IYPGHGNIVKEP 275
+L C +EN LF G + G +FE L TY K + I LKP + IY N +P
Sbjct: 197 ILKCQDENTLFRGQSL--SGKMLFEILTTYGK-MYLITTLKPVVDKIYKERKNCEVDP 251
>AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase
activating protein GAP-1 protein.
Length = 629
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 442 VLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLKPNI--IYPGHGNIVKEP 275
+L C +EN LF G + G +FE L TY K + I LKP + IY N +P
Sbjct: 197 ILKCQDENTLFRGQSL--SGKMLFEILTTYGK-MYLITTLKPVVDKIYKERKNCEVDP 251
>AL033514-16|CAA22103.2| 465|Caenorhabditis elegans Hypothetical
protein Y75B8A.16 protein.
Length = 465
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +2
Query: 479 FDCSSF---YFNFLSVSKPFYWNRCW*FIISRIF*TL-LVLPYY 598
F CS F F V P +RCW F +S I TL +V+P Y
Sbjct: 55 FSCSLFELIIFEIAGVMAPLSRSRCWTFCLSLILITLVVVIPVY 98
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 532 IEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCL--EENILFSGDCILGEGTAVFED-- 365
+ WL+DG+EI + + H G H++ C+ + + +FS GT + E
Sbjct: 1761 VTWLKDGREI-LRTNRIYHHFVTGDGESHLIAECVVSKTSGIFSCKAENPNGTVIAETQV 1819
Query: 364 LYTYMKSLQKILDLKPNIIYP 302
+ MK ++ ++ P P
Sbjct: 1820 IVQRMKPANQLANVAPKFTIP 1840
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 532 IEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCL--EENILFSGDCILGEGTAVFED-- 365
+ WL+DG+EI + + H G H++ C+ + + +FS GT + E
Sbjct: 1776 VTWLKDGREI-LRTNRIYHHFVTGDGESHLIAECVVSKTSGIFSCKAENPNGTVIAETQV 1834
Query: 364 LYTYMKSLQKILDLKPNIIYP 302
+ MK ++ ++ P P
Sbjct: 1835 IVQRMKPANQLANVAPKFTIP 1855
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 532 IEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCL--EENILFSGDCILGEGTAVFED-- 365
+ WL+DG+EI + + H G H++ C+ + + +FS GT + E
Sbjct: 17587 VTWLKDGREI-LRTNRIYHHFVTGDGESHLIAECVVSKTSGIFSCKAENPNGTVIAETQV 17645
Query: 364 LYTYMKSLQKILDLKPNIIYP 302
+ MK ++ ++ P P
Sbjct: 17646 IVQRMKPANQLANVAPKFTIP 17666
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 532 IEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCL--EENILFSGDCILGEGTAVFED-- 365
+ WL+DG+EI + + H G H++ C+ + + +FS GT + E
Sbjct: 17602 VTWLKDGREI-LRTNRIYHHFVTGDGESHLIAECVVSKTSGIFSCKAENPNGTVIAETQV 17660
Query: 364 LYTYMKSLQKILDLKPNIIYP 302
+ MK ++ ++ P P
Sbjct: 17661 IVQRMKPANQLANVAPKFTIP 17681
>Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 IVKEPVEK-IEYYIAHRNQR-EEQILEALKTNSDKNLNEMDLVKIIYTETPEHLWPAAAY 116
+ KE +EK EY + +++ +E++ EALK N D + +K + E L A
Sbjct: 94 VAKELIEKEAEYEGEYEDEKVDEEVEEALKYNEDATQDATSTLKPAVRKEIEKLKEAKCK 153
Query: 115 NVNHH 101
+ HH
Sbjct: 154 DYCHH 158
>Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 IVKEPVEK-IEYYIAHRNQR-EEQILEALKTNSDKNLNEMDLVKIIYTETPEHLWPAAAY 116
+ KE +EK EY + +++ +E++ EALK N D + +K + E L A
Sbjct: 96 VAKELIEKEAEYEGEYEDEKVDEEVEEALKYNEDATQDATSTLKPAVRKEIEKLKEAKCK 155
Query: 115 NVNHH 101
+ HH
Sbjct: 156 DYCHH 160
>Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 IVKEPVEK-IEYYIAHRNQR-EEQILEALKTNSDKNLNEMDLVKIIYTETPEHLWPAAAY 116
+ KE +EK EY + +++ +E++ EALK N D + +K + E L A
Sbjct: 94 VAKELIEKEAEYEGEYEDEKVDEEVEEALKYNEDATQDATSTLKPAVRKEIEKLKEAKCK 153
Query: 115 NVNHH 101
+ HH
Sbjct: 154 DYCHH 158
>Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 IVKEPVEK-IEYYIAHRNQR-EEQILEALKTNSDKNLNEMDLVKIIYTETPEHLWPAAAY 116
+ KE +EK EY + +++ +E++ EALK N D + +K + E L A
Sbjct: 96 VAKELIEKEAEYEGEYEDEKVDEEVEEALKYNEDATQDATSTLKPAVRKEIEKLKEAKCK 155
Query: 115 NVNHH 101
+ HH
Sbjct: 156 DYCHH 160
>X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein.
Length = 438
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 IVKEPVEK-IEYYIAHRNQR-EEQILEALKTNSDKNLNEMDLVKIIYTETPEHLWPAAAY 116
+ KE +EK EY + +++ +E++ EALK N D + +K + E L A
Sbjct: 96 VAKELIEKEAEYEGEYEDEKVDEEVEEALKYNEDATQDATSTLKPAVRKEIEKLKEAKCK 155
Query: 115 NVNHH 101
+ HH
Sbjct: 156 DYCHH 160
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -3
Query: 529 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 362
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 361 YTYMKSLQK 335
T ++SL+K
Sbjct: 2979 LTVIESLEK 2987
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family
protein 2 protein.
Length = 423
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 127 AAAYNVNHHLTKLVKECKVKCVNNDGEK 44
AAA ++ HL K ECKV+ + D E+
Sbjct: 366 AAASLLSKHLAKASSECKVEATSEDSEE 393
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 544 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 443
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 3860 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 3892
>AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 IVKEPVEK-IEYYIAHRNQR-EEQILEALKTNSDKNLNEMDLVKIIYTETPEHLWPAAAY 116
+ KE +EK EY + +++ +E++ EALK N D + +K + E L A
Sbjct: 94 VAKELIEKEAEYEGEYEDEKVDEEVEEALKYNEDATQDATSTLKPAVRKEIEKLKEAKCK 153
Query: 115 NVNHH 101
+ HH
Sbjct: 154 DYCHH 158
>AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 IVKEPVEK-IEYYIAHRNQR-EEQILEALKTNSDKNLNEMDLVKIIYTETPEHLWPAAAY 116
+ KE +EK EY + +++ +E++ EALK N D + +K + E L A
Sbjct: 96 VAKELIEKEAEYEGEYEDEKVDEEVEEALKYNEDATQDATSTLKPAVRKEIEKLKEAKCK 155
Query: 115 NVNHH 101
+ HH
Sbjct: 156 DYCHH 160
>AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 IVKEPVEK-IEYYIAHRNQR-EEQILEALKTNSDKNLNEMDLVKIIYTETPEHLWPAAAY 116
+ KE +EK EY + +++ +E++ EALK N D + +K + E L A
Sbjct: 94 VAKELIEKEAEYEGEYEDEKVDEEVEEALKYNEDATQDATSTLKPAVRKEIEKLKEAKCK 153
Query: 115 NVNHH 101
+ HH
Sbjct: 154 DYCHH 158
>AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 IVKEPVEK-IEYYIAHRNQR-EEQILEALKTNSDKNLNEMDLVKIIYTETPEHLWPAAAY 116
+ KE +EK EY + +++ +E++ EALK N D + +K + E L A
Sbjct: 96 VAKELIEKEAEYEGEYEDEKVDEEVEEALKYNEDATQDATSTLKPAVRKEIEKLKEAKCK 155
Query: 115 NVNHH 101
+ HH
Sbjct: 156 DYCHH 160
>AF125459-11|AAD12842.2| 315|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 24 protein.
Length = 315
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 115 YMQLLATSVPVSRCILFSLNPFHLDFYQNLFSKLLIFV 228
Y LATS+P R ++ S+ FH+ Q+++S + + +
Sbjct: 261 YFAFLATSIPSIRAMMLSI-AFHIFDVQHVYSPIALLI 297
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 544 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 443
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 3813 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 3845
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 544 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 443
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 4098 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 4130
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 544 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 443
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 4098 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 4130
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 544 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 443
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 4057 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 4089
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 10 NSSPSLKCPAISFHHRY*HT 69
NSS +LKCP ++H++Y T
Sbjct: 97 NSSKTLKCPKCNWHYKYQET 116
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -3
Query: 529 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 362
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2279 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2338
Query: 361 YTYMKSLQK 335
T ++SL+K
Sbjct: 2339 LTVIESLEK 2347
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -3
Query: 529 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 362
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 361 YTYMKSLQK 335
T ++SL+K
Sbjct: 2979 LTVIESLEK 2987
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -3
Query: 529 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 362
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 361 YTYMKSLQK 335
T ++SL+K
Sbjct: 2979 LTVIESLEK 2987
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -3
Query: 529 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 362
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2279 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2338
Query: 361 YTYMKSLQK 335
T ++SL+K
Sbjct: 2339 LTVIESLEK 2347
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -3
Query: 529 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 362
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 361 YTYMKSLQK 335
T ++SL+K
Sbjct: 2979 LTVIESLEK 2987
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 544 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 443
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 3829 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 3861
>Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -3
Query: 391 GEGTAVFEDLYTYMKSLQKILDLKPNIIYPGHGNIVKEPV---EKI-EYYIAHRNQREEQ 224
G GT F+DLY K + I+DL+ + H + K V EK+ + ++ + +
Sbjct: 18 GNGTNTFDDLYVDDKMRRMIVDLQRQWLTDYHDSREKSLVALTEKLHQEFMEDQERVRRD 77
Query: 223 ILEALKTNSDKNLNEMD 173
+L K D+ E++
Sbjct: 78 LLVQFKIELDQTKEELE 94
>Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical
protein C10C5.3 protein.
Length = 399
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 304 PGHGNIVKE--PVEKIEYYIAHRNQREEQILEALKTNSDKNLNEMDLVKI 161
PGHG+ E +EK+E Y+A + ++ L++N D + ++ + +
Sbjct: 200 PGHGSQFMENTAMEKLERYLASARKFRDEQKALLESNPDLTIGDVTTLNV 249
>AY661556-1|AAV70493.1| 714|Caenorhabditis elegans
acetylcholine/choline transporter protein.
Length = 714
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 197 RICFQSF*YLFFSLISVSYIIFNFFNGFLYYIPMTRVNNVW 319
++ F +FF++IS ++ +F N F + IP + N W
Sbjct: 149 QVTISGFFAVFFNIIS-AWTLFYLINSFSFSIPWSNCANSW 188
>AF078786-4|AAC26944.4| 714|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 6
protein.
Length = 714
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 197 RICFQSF*YLFFSLISVSYIIFNFFNGFLYYIPMTRVNNVW 319
++ F +FF++IS ++ +F N F + IP + N W
Sbjct: 149 QVTISGFFAVFFNIIS-AWTLFYLINSFSFSIPWSNCANSW 188
>AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical
protein C53D5.2 protein.
Length = 254
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 166 SLNPFHLDFYQNLFSKL-LIFVLLFDFCELYNIQFFQRVPLL 288
SL+ H+D L + L LI VL+ FC + IQF Q LL
Sbjct: 83 SLHVPHVDRSSCLLNVLFLITVLIMIFCGYFTIQFIQENALL 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,316,162
Number of Sequences: 27780
Number of extensions: 316609
Number of successful extensions: 1137
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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