Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_A09
(780 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 314 7e-86
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 313 9e-86
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 310 6e-85
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 309 2e-84
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 308 4e-84
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 188 4e-48
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 179 2e-45
07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207 28 7.2
06_03_1221 - 28514952-28518152 28 7.2
05_02_0101 + 6611694-6611834,6612651-6612734,6613035-6613096,661... 28 7.2
03_03_0278 - 16126803-16129049 28 7.2
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 28 9.6
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 314 bits (770), Expect = 7e-86
Identities = 150/213 (70%), Positives = 175/213 (82%)
Frame = -1
Query: 777 VIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXX 598
V+ISAPSADAPMFVVGVN + Y+PS V+SNASCTTNCLAPLAK++H+ F I EGLM
Sbjct: 196 VVISAPSADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTV 255
Query: 597 XXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVA 418
VDGPS K WR GRGA QNIIP+STGAAKAVGKV+PALNGKLTGMAFRVP
Sbjct: 256 HATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTP 315
Query: 417 NVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAA 238
NVSVVDLT RL K ASYE +K +KEA+EG LKGILGYT++ VVS+DFIGD+ SSIFDA
Sbjct: 316 NVSVVDLTCRLEKSASYEDVKAAIKEASEGSLKGILGYTDEDVVSNDFIGDTRSSIFDAK 375
Query: 237 AGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 139
AGI L+ +F+KL+SWYDNE+GYS+RV+DLI ++
Sbjct: 376 AGIGLSSSFMKLVSWYDNEWGYSNRVLDLIGHM 408
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 313 bits (769), Expect = 9e-86
Identities = 151/213 (70%), Positives = 173/213 (81%)
Frame = -1
Query: 777 VIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXX 598
V+ISAPS DAPMFVVGVN + Y P ++SNASCTTNCLAPLAKVI+D F IVEGLM
Sbjct: 169 VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 228
Query: 597 XXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVA 418
VDGPS K WR GR A NIIP+STGAAKAVGKV+PALNGKLTGMAFRVP
Sbjct: 229 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 288
Query: 417 NVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAA 238
+VSVVDLTVRL KPASY+ IK +KE +EG LKGILGY E+ +VS+DF GD+ SSIFDA
Sbjct: 289 DVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAK 348
Query: 237 AGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 139
AGI+LNDNFVKL+SWYDNE+GYSSRV+DLI+++
Sbjct: 349 AGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 381
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 310 bits (762), Expect = 6e-85
Identities = 147/213 (69%), Positives = 174/213 (81%)
Frame = -1
Query: 777 VIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXX 598
V+ISAPSADAPMFVVGVN ++YDP V+SNASCTTNCLAPLAKV+H+ F IVEGLM
Sbjct: 255 VVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTV 314
Query: 597 XXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVA 418
VDGPS K WR GRGA QNIIP+STGAAKAVGKV+P LNGKLTGMAFRVP
Sbjct: 315 HATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTP 374
Query: 417 NVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAA 238
NVSVVDLT R+ K ASY+ +K +K A+EG LKGILGYT++ VVS+DF+GD+ SSIFDA
Sbjct: 375 NVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAK 434
Query: 237 AGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 139
AGI L+ +F+KL+SWYDNE+GYS+RV+DLI ++
Sbjct: 435 AGIGLSSSFMKLVSWYDNEWGYSNRVLDLIAHM 467
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 309 bits (758), Expect = 2e-84
Identities = 146/213 (68%), Positives = 172/213 (80%)
Frame = -1
Query: 777 VIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXX 598
V+ISAPS DAPMFV GVN + Y ++SNASCTTNCLAPLAKVIHDNF I+EGLM
Sbjct: 144 VVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTV 203
Query: 597 XXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVA 418
VDGPS K WR GR A NIIP+STGAAKAVGKV+P LNGKLTGM+FRVP
Sbjct: 204 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 263
Query: 417 NVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAA 238
+VSVVDLTVR+ K ASY+AIK +K A+EG LKGI+GY E+ +VS+DF+GDS SSIFDA
Sbjct: 264 DVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAK 323
Query: 237 AGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 139
AGI+LNDNFVKL++WYDNE+GYS+RVIDLI+++
Sbjct: 324 AGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHM 356
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 308 bits (755), Expect = 4e-84
Identities = 151/215 (70%), Positives = 172/215 (80%)
Frame = -1
Query: 777 VIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXX 598
V+ISAPS DAPMFVVGVN + Y ++SNASCTTNCLAPLAKVI+D F IVEGLM
Sbjct: 140 VVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 199
Query: 597 XXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVA 418
VDGPS K WR GR A NIIP+STGAAKAVGKV+PALNGKLTGMAFRVP
Sbjct: 200 HAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 259
Query: 417 NVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAA 238
+VSVVDLTVRL KPASY+ IK +KE AEG LKGILGY E+ +VS+DF GDS SSIFDA
Sbjct: 260 DVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAK 319
Query: 237 AGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQS 133
AGI+L+D FVKL+SWYDNE+GYS+RVIDLI+++ S
Sbjct: 320 AGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHS 354
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 188 bits (458), Expect = 4e-48
Identities = 98/217 (45%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Frame = -1
Query: 777 VIISAPS-ADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 601
V+I+AP D P +VVGVN + Y P +ISNASCTTNCLAP K++ F I++G M
Sbjct: 185 VLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMTT 244
Query: 600 XXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPV 421
+D L R R A NI+P STGAAKAV V+P L GKL G+A RVP
Sbjct: 245 THSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 303
Query: 420 ANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDA 241
NVSVVDL V++ K E + Q +++A LKGIL + +VS DF S DA
Sbjct: 304 PNVSVVDLVVQVSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTIDA 363
Query: 240 AAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 130
+ + + D+ VK+I+WYDNE+GYS RV+DL + ++
Sbjct: 364 SLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQ 400
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 179 bits (436), Expect = 2e-45
Identities = 100/220 (45%), Positives = 131/220 (59%), Gaps = 4/220 (1%)
Frame = -1
Query: 777 VIISAPS--ADAPMFVVGVNLEAYDPSF-KVISNASCTTNCLAPLAKVIHDNFEIVEGLM 607
VII+AP+ AD P +V+GVN Y +ISNASCTTNCLAP K++ + F IV+G M
Sbjct: 195 VIITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTM 254
Query: 606 XXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRV 427
+D L R R A NI+P STGAAKAV V+P L GKL G+A RV
Sbjct: 255 TTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRV 313
Query: 426 PVANVSVVDLTVRLGKPA-SYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSI 250
P NVSVVDL + K + + + ++AA GPL GIL + +VS DF SS
Sbjct: 314 PTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGILDVCDVPLVSVDFRCSDVSST 373
Query: 249 FDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 130
DA+ + + D+ VK+++WYDNE+GYS RV+DL + SK
Sbjct: 374 IDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASK 413
>07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207
Length = 153
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 179 YSLSYQLISFTKLSFKEIPAAASKIEECESPMK 277
YSL + + TK FK+ K EEC +P K
Sbjct: 77 YSLVMKCLENTKNDFKKCKTLIDKYEECSNPPK 109
>06_03_1221 - 28514952-28518152
Length = 1066
Score = 28.3 bits (60), Expect = 7.2
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = -1
Query: 567 DGPSGKLWRDGRGAQQNIIP--ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLT 394
DG +LW GRG I P A+ A + +L+G+ + F +P N +VVD++
Sbjct: 72 DGAVTRLWLPGRGLGGTISPSIANLTALTYLNLSGNSLSGRFPDLLFALP--NATVVDVS 129
Query: 393 VRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAG-ISLN 220
S E V AA +G L V S+ G S+I++ +SLN
Sbjct: 130 Y---NRLSGELPNAPVAAAAATNARGSLSLQVLDVSSNLLAGRFPSAIWEHTPRLVSLN 185
>05_02_0101 +
6611694-6611834,6612651-6612734,6613035-6613096,
6613304-6613322
Length = 101
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 525 QQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKV 346
QQ A+TG K V P +NG +GM + + +V + ++LG+ ++ + K +
Sbjct: 9 QQQTAAAATGVWKTVK---PFVNGGASGMLATCVIQPIDMVKVKIQLGEGSAAQVTKNML 65
Query: 345 KEAAEGPL-KGI 313
G KG+
Sbjct: 66 ANEGIGSFYKGL 77
>03_03_0278 - 16126803-16129049
Length = 748
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3
Query: 694 HLKCFLHHKLSCPTCK 647
+LK +L+H L CPTC+
Sbjct: 220 YLKVYLNHNLLCPTCR 235
>03_05_0398 +
23790257-23790323,23791116-23791339,23792208-23792275,
23794738-23794980,23795108-23795237,23797235-23797954
Length = 483
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 616 LNNFKVIMNNLCKWGKTVCGARSI*DDL 699
LN +++L + G T CGARSI DD+
Sbjct: 426 LNENATGVHDLYRGGATACGARSIWDDM 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,707,963
Number of Sequences: 37544
Number of extensions: 374626
Number of successful extensions: 984
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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