Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_A07
(780 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 86 3e-17
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 80 2e-15
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 80 2e-15
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 71 8e-13
01_06_0729 - 31546464-31546574,31546653-31546694,31546795-315468... 69 3e-12
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 69 6e-12
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 64 2e-10
01_01_0746 + 5772340-5773083 44 1e-04
11_03_0046 - 9309754-9309820,9310414-9311132 32 0.59
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 31 1.0
09_04_0393 + 17255315-17256019,17256107-17257909 29 5.5
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 28 7.2
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 86.2 bits (204), Expect = 3e-17
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 4/243 (1%)
Frame = -1
Query: 771 ITLNHEKTKNSLSLNMMNHLIEAINKNKEDISLRAIIISAKGNVFSAGHNLKELQSSSGV 592
+T+N K N+L+ MM L A + D + A++++ +G F +G +L +
Sbjct: 26 VTINRPKALNALTRPMMVSLAAAFRRLDADDGVAAVVLAGRGRAFCSGVDLTAAEEVFKG 85
Query: 591 DQHKEIFSKATELMKSIILSPVPVIAKVNGFATAAGCQLVATCDIIVCSDSSKFSTPGAN 412
D + A + + + P++ + GFA AG ++ CDI+V S+KF A
Sbjct: 86 D----VKDPAADPVVQMERCRKPIVGAIAGFAVTAGFEIALACDILVAGRSAKFIDTHAK 141
Query: 411 FGIFCSTPGIA--LGRSVCKSKATYMLFTGEPINAQEAYESGLVTKVVPANELDNEVGKI 238
FGIF S G++ L R + ++A + T PI A+ A + GLV +V ++ ++ ++
Sbjct: 142 FGIFPSW-GLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIVDDTQVLSKAIEV 200
Query: 237 IEKIKHKSRSVISMGKEFFYQQIELSLFNAYDLGEKXMVD--NVAXKDGQEGXLSFVEKR 64
E I +R+++ + K ++L L +A L ++ D N K+ F++ R
Sbjct: 201 CEAIARNNRNLVVLYKSVINDGLQLDLEHARALEKERAHDYYNGMTKEQFASMQKFIQGR 260
Query: 63 KAK 55
+K
Sbjct: 261 SSK 263
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 80.2 bits (189), Expect = 2e-15
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 31/266 (11%)
Frame = -1
Query: 765 LNHEKTKNSLSLNMMNHLIEAINKNKEDISLRAIII-SAKGNVFSAGHNLKELQSSSGVD 589
L + +N++ M+ L AI K K D + + +++ S+ VF AG +LKE + S +
Sbjct: 59 LERPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLKERRLMSPCE 118
Query: 588 QHKEIFSKATELMKSIILSPVPVIAKVNGFATAAGCQLVATCDIIVCSDSSKFSTPGANF 409
+ + S + + LS +P IA V G A G +L +CD+ +C +++ FS P
Sbjct: 119 VREFVNSLRSTFLSFEALS-IPTIAIVEGAAFGGGLELALSCDLRICGENATFSLPETGL 177
Query: 408 GI----------FCSTPGIALGRSVCKSKATYMLFTGEPINAQEA--------------- 304
I + S L R V KS+A ++FTG +A EA
Sbjct: 178 AIIPGYVFKMALYFSGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGKVGLAPSFLRG 237
Query: 303 -----YESGLVTKVVPANELDNEVGKIIEKIKHKSRSVISMGKEFFYQQIELSLFNAYDL 139
+G+V VPA E ++ ++I K I M K+ Q +E+ L +
Sbjct: 238 VLLHFISTGVVNYCVPAGEAYKRALELAQEINQKGPLAIRMAKKAINQGMEVDLSAGLAV 297
Query: 138 GEKXMVDNVAXKDGQEGXLSFVEKRK 61
E+ + +D EG +F EKRK
Sbjct: 298 EEECYEQVLHTQDRLEGLAAFAEKRK 323
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 80.2 bits (189), Expect = 2e-15
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 2/239 (0%)
Frame = -1
Query: 771 ITLNHEKTKNSLSLNMMNHLIEAINKNKEDISLRAIIISAKGNVFSAGHNLKELQSSSG- 595
IT+N +N+ + L+ A ++D S+ II++ KG + L+ + G
Sbjct: 84 ITINRPDRRNAFRPLTVKELMRAFEDARDDSSIGVIILTGKGTQSFCSGGDQALRDADGY 143
Query: 594 VDQHKEIFSKATELMKSIILSPVPVIAKVNGFATAAGCQLVATCDIIVCSDSSKFSTPGA 415
VD +L I P PVIA V G+A G L CD+ + +D++ F G
Sbjct: 144 VDFDSFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGP 203
Query: 414 NFGIFCSTPGIA-LGRSVCKSKATYMLFTGEPINAQEAYESGLVTKVVPANELDNEVGKI 238
G F + G + + R V KA M F A EA GLV VVP +L+ E K
Sbjct: 204 KVGSFDAGYGTSIMSRLVGPKKAREMWFLSRFYTADEADRMGLVNVVVPLADLERETVKW 263
Query: 237 IEKIKHKSRSVISMGKEFFYQQIELSLFNAYDLGEKXMVDNVAXKDGQEGXLSFVEKRK 61
KI S + I + K + +LG + ++ +EG +++E+R+
Sbjct: 264 CRKILRNSPTAIRVLKSAL-NAADDGHAGLQELGGNATLIFYGTEEAKEGKNAYMERRR 321
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 71.3 bits (167), Expect = 8e-13
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = -1
Query: 528 VPVIAKVNGFATAAGCQLVATCDIIVCSDSSKFSTPGANFGIFCSTPGIA-LGRSVCKSK 352
+P IA + G A G +L +CD+ +C +++ P I G L R V +S+
Sbjct: 106 IPTIAVIEGAALGGGLELALSCDLRICGENATLGLPETGLAIIPGAGGTQRLPRIVGRSR 165
Query: 351 ATYMLFTGEPINAQEAYESGLVTKVVPANELDNEVGKIIEKIKHKSRSVISMGKEFFYQQ 172
A M+FTG NA EA GL VPA E + ++ +I K I M K+ Q
Sbjct: 166 AKEMIFTGRRCNATEAVMMGLANYCVPAGEAHEKALELAREIAQKGPLGIRMAKKAIDQG 225
Query: 171 IELS-LFNAYDLGEKXMVDNVAXKDGQEGXLSFVEKRK 61
++ + + +A + + + +D EG +F E+RK
Sbjct: 226 MQAADMPSALAVEGECYEQLLHTEDRLEGLAAFAERRK 263
>01_06_0729 -
31546464-31546574,31546653-31546694,31546795-31546896,
31547148-31547246,31547522-31547582,31547659-31547807,
31547963-31548048,31548249-31548333,31548642-31548725,
31548820-31548893,31549035-31549095,31549546-31549614,
31549712-31549795,31549893-31549937
Length = 383
Score = 69.3 bits (162), Expect = 3e-12
Identities = 49/204 (24%), Positives = 85/204 (41%)
Frame = -1
Query: 777 RXITLNHEKTKNSLSLNMMNHLIEAINKNKEDISLRAIIISAKGNVFSAGHNLKELQSSS 598
R LN + N +S ++ L + + ++D + +I G FSAG +LK
Sbjct: 26 RVAILNRPRQLNVISDRVVYLLAQFLESWEKDEDAKLVIFKGAGRAFSAGGDLKMFYEGK 85
Query: 597 GVDQHKEIFSKATELMKSIILSPVPVIAKVNGFATAAGCQLVATCDIIVCSDSSKFSTPG 418
D E+ + L I +A VNG G +VA V ++ + F+TP
Sbjct: 86 SDDSCLEVVYRMYWLCYHIHTYKKTAVALVNGLVMGGGAAMVAPLKFAVVTEKTVFATPE 145
Query: 417 ANFGIFCSTPGIALGRSVCKSKATYMLFTGEPINAQEAYESGLVTKVVPANELDNEVGKI 238
A+ G+ + + Y+ TG +NA+E +GL T VP+ +L+ E+ K
Sbjct: 146 ASVGLHTDCSFSYIHSRLPGYLGEYLALTGARLNAKEMIAAGLATHFVPSEKLE-ELEKC 204
Query: 237 IEKIKHKSRSVISMGKEFFYQQIE 166
+ + S + E F ++
Sbjct: 205 LLNLNTGDESAVRAAIEEFSTDVQ 228
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 68.5 bits (160), Expect = 6e-12
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
Frame = -1
Query: 744 NSLSLNMMNHLIEAINKNKEDISLRAIIISAKGNVFSAGHNLKELQSSSG--VDQHKEIF 571
NSLS++++ L E + ++AI+++ KG FS G ++ S G V+Q K +
Sbjct: 31 NSLSIDVLLSLKENYAEALRRNDVKAIVVTGKGGKFSGGFDISSFGSVQGGKVEQPKVGY 90
Query: 570 SKATELMKSIILSPVPVIAKVNGFATAAGCQLVATCDIIVCSDSSKFSTPGANFGIFCST 391
+ ++ + P +A ++G A G ++ C + + +++ P G+
Sbjct: 91 ISIDIITDTLEAATKPSVAAIDGLALGGGLEVAMACHARISTPTAQLGLPELQLGVIPGF 150
Query: 390 PGIA-LGRSVCKSKATYMLFTGEPINAQEAYESGLVTKVVPANELDN 253
G L R V +KA M+ +PI EA++ GLV +V A++L N
Sbjct: 151 GGTQRLPRLVGLTKALEMMLLSKPIKGAEAHQLGLVDSLVSADDLVN 197
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 63.7 bits (148), Expect = 2e-10
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Frame = -1
Query: 744 NSLSLNMM----NHLIEAINKNKEDISLRAIIISAKGNVFSAGHNLKELQS--SSGVDQH 583
N+LS++++ +H EA+ +N ++AI+++ KG VFS G ++ + + +Q
Sbjct: 27 NALSIHVLYSLKDHYEEALRRN----DVKAIVVTGKGGVFSGGLDINTFGAIQRNKAEQL 82
Query: 582 KEIFSKATELMKSIILSPVPVIAKVNGFATAAGCQLVATCDIIVCSDSSKFSTPGANFGI 403
K + + ++ + P +A +NG A G ++ C + +++ P G+
Sbjct: 83 KVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVCQARISIPTAQLGLPELQLGV 142
Query: 402 FCSTPGIA-LGRSVCKSKATYMLFTGEPINAQEAYESGLVTKVVPANELDN 253
+ G L R V +KA M+ +PI A+EA++ L+ +V N+L N
Sbjct: 143 IPAFGGTQRLPRLVGLTKALEMMLMSKPIKAEEAHQLALIDAIVSPNDLLN 193
>01_01_0746 + 5772340-5773083
Length = 247
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = -1
Query: 669 AIIISAKGNVFSAGHNLKELQSSSGVDQHKEIFSKATELMKSIILSPVPVIAKVNGFATA 490
A++I+ +G FS G +L + + + H + L+ ++ PVP +A V G A A
Sbjct: 54 ALVIAGEGKYFSNGFDL-DWARTVPAELHASMGGAFRGLVADLLALPVPTVAAVTGHAAA 112
Query: 489 AGCQLVATCDIIVCSDSSKF 430
AGC L D +V S F
Sbjct: 113 AGCALALAHDAVVMRASRGF 132
>11_03_0046 - 9309754-9309820,9310414-9311132
Length = 261
Score = 31.9 bits (69), Expect = 0.59
Identities = 21/100 (21%), Positives = 46/100 (46%)
Frame = -1
Query: 714 LIEAINKNKEDISLRAIIISAKGNVFSAGHNLKELQSSSGVDQHKEIFSKATELMKSIIL 535
LI ++ ++ LR ++ +++ F G + + +++ ++ E+++ ++
Sbjct: 35 LIASLTAVRDTPGLRGLVTTSRLGSFCDG-----VDHDAARQPDEQVAARVGEVVRLLLE 89
Query: 534 SPVPVIAKVNGFATAAGCQLVATCDIIVCSDSSKFSTPGA 415
P P A VNG AT+ G L D V + + + P A
Sbjct: 90 MPAPTAAAVNGDATSLGLALALAHDHCVVWEGAAVALPEA 129
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = -1
Query: 324 PINAQEAYESGLVTKVVPANELDNEVGKIIEKIKHKSRSVISMGKEFFYQQ 172
P+N + ES ++ KV PANEL EV + +IKH + ++++ ++ F QQ
Sbjct: 84 PVNL--SLESPML-KVQPANELIREVATLELEIKHLEQYLLTLYRKAFDQQ 131
>09_04_0393 + 17255315-17256019,17256107-17257909
Length = 835
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -1
Query: 366 VCKSKATYMLFTGEPINAQEAYESGLVTKVVPANELDNEVGKI 238
+ S+A +++ G+ INA AY+ +V ++D+EV K+
Sbjct: 396 ITTSQANHVIAEGKKINAALAYQQDMVNWQNELKQIDDEVQKL 438
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1
Query: 654 AKGNVFSAGHNLKELQSSSGVDQHKEIFSKATELMKSIILSPVPVIAKVNG 502
A +V A ++++ + + V++ +EIF+ A ELM + SPV V G
Sbjct: 34 APRSVVRAAISVEKGEKAYTVEKSEEIFNAAKELMPGGVNSPVRAFKSVGG 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,279,677
Number of Sequences: 37544
Number of extensions: 347227
Number of successful extensions: 941
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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