Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_A05
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0155 - 17321982-17322214,17323550-17323590,17323831-173238... 57 1e-08
11_03_0139 + 10632020-10632211,10632876-10632937,10633141-106331... 57 2e-08
12_01_0791 + 7234021-7234221,7234801-7234862,7235441-7235481,723... 55 7e-08
02_02_0177 + 7484526-7484723,7484913-7484974,7485606-7485646,748... 54 2e-07
11_01_0326 - 2435918-2436135,2436232-2436272,2436486-2436547,243... 50 3e-06
12_01_0332 - 2564541-2564758,2564847-2564887,2565138-2565199,256... 49 5e-06
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 48 8e-06
06_01_0411 + 2939148-2939354,2939517-2939578,2939712-2939752,294... 48 1e-05
04_03_0855 - 20328695-20328912,20329128-20329168,20329782-203298... 46 2e-05
06_03_0423 - 20624149-20624375,20625581-20625621,20625709-206257... 46 3e-05
01_01_0831 + 6493897-6494100,6494195-6494256,6498047-6498087,649... 45 7e-05
02_04_0085 - 19587026-19587243,19587509-19587549,19587811-195878... 44 2e-04
01_01_0723 + 5651593-5651751,5651896-5651957,5652130-5652170,565... 40 0.002
04_03_0967 + 21318974-21319140,21321677-21321821,21322045-213221... 31 0.74
05_06_0093 - 25468271-25468320,25468393-25468433,25468592-254686... 31 0.98
08_02_0597 + 19132492-19133230,19133827-19134371,19134563-19135264 30 1.7
11_05_0033 + 18500092-18501372,18502419-18502826,18502948-185029... 29 5.2
04_04_1067 - 30545277-30545595,30545693-30545801,30545841-305459... 29 5.2
01_01_0362 - 2843659-2844468,2844669-2844699,2844824-2844903,284... 29 5.2
05_04_0096 - 17931061-17931435,17931539-17931620,17932319-179324... 28 6.9
04_04_0841 - 28574497-28574883,28575815-28576188,28576262-285764... 28 6.9
>06_03_0155 -
17321982-17322214,17323550-17323590,17323831-17323892,
17324051-17324245
Length = 176
Score = 57.2 bits (132), Expect = 1e-08
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Frame = -3
Query: 732 FLPHLXIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDDSALWTLAFTSLDGHLY 553
F+P + V + KD T G IKP+ A P + + L+ L T D
Sbjct: 21 FVPTTAMSVRFGTKDLT-----NGCEIKPSVAAAPPAVQIAGRVNELFALVMTDPDAPSP 75
Query: 552 ENE--KEYVHWLVANIPGSA-IEKGETLVEYLQPFPLKGTGYHRYVFVLYKQDKTIDYAL 382
+E++HWLV NIPG +G+ +V Y+ P P G HRYV VL++Q +
Sbjct: 76 SEPTMREWLHWLVVNIPGGTDPSQGDVVVPYMGPRP--PVGIHRYVMVLFQQKARVAAPP 133
Query: 381 PKVTSSSALQDRTFVTREWYKKHQDNITPIGLAF 280
P ++ A F TR + +H + L F
Sbjct: 134 PDEDAARA----RFSTRAFADRHDLGLPVAALYF 163
>11_03_0139 +
10632020-10632211,10632876-10632937,10633141-10633181,
10633667-10633883,10634229-10634271
Length = 184
Score = 56.8 bits (131), Expect = 2e-08
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Frame = -3
Query: 732 FLPHLXIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDDS-ALWTLAFTSLDGHL 556
F+ + V YN K+ T G+ +KP++ L P I + D L+TL D
Sbjct: 19 FVTTASLRVFYNSKEMT-----NGSELKPSQVLNQPRIYIEGRDMRTLYTLVMVDPDAPS 73
Query: 555 YEN--EKEYVHWLVANIPGSAIEK-GETLVEYLQPFPLKGTGYHRYVFVLYKQ 406
N ++EY+HW+V +IP + + G +V Y P P G HR+VF+L++Q
Sbjct: 74 PSNPTKREYLHWMVTDIPETTDARFGNEIVPYESPRPT--AGIHRFVFILFRQ 124
>12_01_0791 +
7234021-7234221,7234801-7234862,7235441-7235481,
7235711-7235940
Length = 177
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = -3
Query: 666 AGNVIKPTEALEAPI--ITYDSDDSALWTLAFTSLDGHLYEN--EKEYVHWLVANIP-GS 502
+G+ ++P++ P IT D AL+TL D N ++EY+HWLV ++P G
Sbjct: 38 SGSELRPSQVAGEPAVQITGGRDGRALYTLVMVDPDAPSPSNPSKREYLHWLVTDVPEGG 97
Query: 501 AIEKGETLVEYLQPFPLKGTGYHRYVFVLYKQ 406
KG +V Y P P G HR VF++++Q
Sbjct: 98 DTSKGTEVVAYESPRPT--AGIHRLVFIVFRQ 127
>02_02_0177 +
7484526-7484723,7484913-7484974,7485606-7485646,
7485845-7486101
Length = 185
Score = 53.6 bits (123), Expect = 2e-07
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Frame = -3
Query: 732 FLPHLXIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDDSAL-WTLAFTSLDGHL 556
F+ + + V+Y DG +PV +G ++ E P++ DD + +TL D
Sbjct: 19 FISTVDLTVMYG-DDG--MPVISGVELRAPAVAEKPVVEVGGDDLRVAYTLVMVDPDAPN 75
Query: 555 YENE--KEYVHWLVANIPGSA-IEKGETLVEYLQPFPLKGTGYHRYVFVLYKQ 406
N +EY+HW+V +IP S G +V Y P P TG HR V VL++Q
Sbjct: 76 PSNPTLREYLHWMVTDIPASTDATYGREVVCYESPNPT--TGIHRMVLVLFRQ 126
>11_01_0326 -
2435918-2436135,2436232-2436272,2436486-2436547,
2436620-2436820
Length = 173
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = -3
Query: 732 FLPHLXIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDD-SALWTLAFTSLD--G 562
F P + + V YN F G+ + P+ + P + D + +TL T D G
Sbjct: 21 FNPCMKMIVTYNSNKLVF----NGHELYPSAVVSKPRVEVQGGDLRSFFTLVMTDPDVPG 76
Query: 561 HLYENEKEYVHWLVANIPGSAIEK-GETLVEYLQPFPLKGTGYHRYVFVLYKQDKTIDYA 385
+E++HW+V +IPG+ G ++ Y P P G HR++FVL+KQ +
Sbjct: 77 PSDPYLREHLHWIVTDIPGTTDASFGREVISYESPKP--NIGIHRFIFVLFKQKRRQTVI 134
Query: 384 LP 379
+P
Sbjct: 135 VP 136
>12_01_0332 -
2564541-2564758,2564847-2564887,2565138-2565199,
2565305-2565505
Length = 173
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = -3
Query: 663 GNVIKPTEALEAPIITYDSDDS-ALWTLAFTSLD--GHLYENEKEYVHWLVANIPGSAIE 493
G+ P+ + P + D + +TL T D G +E++HW+V +IPG+
Sbjct: 40 GHEFYPSAVVSKPRVEVQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA 99
Query: 492 K-GETLVEYLQPFPLKGTGYHRYVFVLYKQDKTIDYALP 379
G ++ Y P P G HR+VFVL+KQ + +P
Sbjct: 100 SFGREIISYESPKP--SIGIHRFVFVLFKQKRRQAVVVP 136
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 48.0 bits (109), Expect = 8e-06
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = -3
Query: 672 VCAGNVIKPTEALEAP-IITYDSDDSALWTLAFTSLDGHLYENE--KEYVHWLVANIPG- 505
V G +KP+ + P ++ +D +TL D N +EY+HWLV +IPG
Sbjct: 38 VSNGCELKPSMVTQQPRVVVGGNDMRTFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPGT 97
Query: 504 SAIEKGETLVEYLQPFPLKGTGYHRYVFVLYKQ 406
+ G+ ++ Y P P G HR VFVL++Q
Sbjct: 98 TGATFGQEVMCYESPRPT--MGIHRLVFVLFQQ 128
>06_01_0411 +
2939148-2939354,2939517-2939578,2939712-2939752,
2941060-2941289
Length = 179
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = -3
Query: 672 VCAGNVIKPTEALEAPIITYDSDDS-ALWTLAFTSLDGHLYE--NEKEYVHWLVANIPG- 505
V G +KP+ P + +D +TL D N +EY+HWLV +IPG
Sbjct: 39 VSNGCELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGT 98
Query: 504 SAIEKGETLVEYLQPFPLKGTGYHRYVFVLYKQ 406
+A G+ ++ Y P P G HR VFVL++Q
Sbjct: 99 TAASFGQEVMCYESPRPT--MGIHRLVFVLFQQ 129
>04_03_0855 -
20328695-20328912,20329128-20329168,20329782-20329843,
20330023-20330223
Length = 173
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = -3
Query: 663 GNVIKPTEALEAPIITYDSDD-SALWTLAFTSLD--GHLYENEKEYVHWLVANIPGSA-I 496
G+ + P+ + P + D + +TL T D G +E++HW+V +IPG+
Sbjct: 40 GHELFPSAVVSKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA 99
Query: 495 EKGETLVEYLQPFPLKGTGYHRYVFVLYKQDK 400
G +V Y P P G HR+V VL+KQ +
Sbjct: 100 SFGREVVSYESPKP--NIGIHRFVLVLFKQKR 129
>06_03_0423 -
20624149-20624375,20625581-20625621,20625709-20625770,
20626147-20626338
Length = 173
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = -3
Query: 675 PVCAGNVIKPTEALEAPIITYDSDDSAL-WTLAFTSLDGHLYENE--KEYVHWLVANIPG 505
PV G + + P + DD +TL D N +EY+HW+V +IP
Sbjct: 33 PVFNGKEFRSSAVSMKPRVEIGGDDFRFAYTLVMVDPDAPNPSNPTLREYLHWMVTDIPS 92
Query: 504 SAIEK-GETLVEYLQPFPLKGTGYHRYVFVLYKQ 406
S + G +V Y P P G HR V VLY+Q
Sbjct: 93 STDDSFGREIVTYESPSPT--MGIHRIVMVLYQQ 124
>01_01_0831 +
6493897-6494100,6494195-6494256,6498047-6498087,
6498218-6498441
Length = 176
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = -3
Query: 672 VCAGNVIKPTEALEAPIITYDSDDS-ALWTLAFTSLDGHLYE--NEKEYVHWLVANIPG- 505
V G ++P+ + P + D +TL D N +EY+HWLV +IP
Sbjct: 38 VANGCELRPSAVADQPRVAVGGPDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPAT 97
Query: 504 SAIEKGETLVEYLQPFPLKGTGYHRYVFVLYKQ 406
+ + G +V Y P P+ G HR VF+L++Q
Sbjct: 98 TGVSFGTEVVCYESPRPV--LGIHRLVFLLFEQ 128
>02_04_0085 -
19587026-19587243,19587509-19587549,19587811-19587872,
19587990-19588190
Length = 173
Score = 43.6 bits (98), Expect = 2e-04
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Frame = -3
Query: 663 GNVIKPTEALEAPIITYDSDD-SALWTLAFTSLD--GHLYENEKEYVHWLVANIPGSA-I 496
G+ P+ P + D + +TL T D G +E++HW+V +IPG+
Sbjct: 40 GHEFFPSAVAGKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA 99
Query: 495 EKGETLVEYLQPFPLKGTGYHRYVFVLYKQDKTIDYALPKVTSSSALQDRTFVTREWYKK 316
G +V Y P P G HR++ VL++Q + + S +DR F TR+ + +
Sbjct: 100 SFGREVVSYESPRP--NIGIHRFILVLFRQKRR------QAVSPPPSRDR-FSTRQ-FAE 149
Query: 315 HQDNITPIGLAFYQSDWDYSVR 250
D P+ ++ + + + R
Sbjct: 150 DNDLGLPVAAVYFNAQRETAAR 171
>01_01_0723 +
5651593-5651751,5651896-5651957,5652130-5652170,
5654105-5654352
Length = 169
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 543 KEYVHWLVANIPGSA-IEKGETLVEYLQPFPLKGTGYHRYVFVLYKQ 406
+EY+HWLV +IPG+ G +V Y P P G HR VL++Q
Sbjct: 69 REYLHWLVTDIPGTTDANYGREVVCYESPRP--AAGIHRVAVVLFRQ 113
>04_03_0967 +
21318974-21319140,21321677-21321821,21322045-21322164,
21322261-21322395,21322503-21322564,21322804-21322879,
21323555-21323656,21323732-21323848,21324403-21324461,
21324927-21325101,21325233-21325367,21325429-21325545,
21325686-21325794,21325939-21326051,21326561-21326615,
21326657-21326769
Length = 599
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 456 PLKGTGYHRYVFVLYKQDKTIDYALPKVTSSSALQDRTFVTREWYKKHQ 310
PL+GT H YV D+ D +L S +D + +EW +K Q
Sbjct: 221 PLRGTHSHAYVSSYMSLDEIPDKSLKSKDGSRVCKDFVSLVKEWLQKIQ 269
>05_06_0093 -
25468271-25468320,25468393-25468433,25468592-25468653,
25468872-25469057
Length = 112
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -3
Query: 666 AGNVIKPTEALEAPIITYDSDDSAL-WTLAFTSLDGHLYENE--KEYVHWLVANIP 508
AG +KP+ + P + +D + +TL D + +EY+HW+V +IP
Sbjct: 34 AGAALKPSAVVSKPQVDVGGNDMRVSYTLVLVDPDAPSPSDPSLREYLHWMVTDIP 89
>08_02_0597 + 19132492-19133230,19133827-19134371,19134563-19135264
Length = 661
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 621 ITYDSD-DSALWTLAFTSLDGHLYENEKEYVHWLVANIPGSAIEKGET 481
+T DSD DSAL +A TS DG Y E +H ++ G+ +G+T
Sbjct: 78 LTLDSDQDSALHVVA-TSGDGEQYVQCAEMIHGRARHLLGATNNRGDT 124
>11_05_0033 +
18500092-18501372,18502419-18502826,18502948-18502990,
18503236-18503282,18504582-18505901
Length = 1032
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 271 TLIKR*SNWCDIILMFFIPF 330
TL +N CD++L+FFIPF
Sbjct: 295 TLFASWANVCDLLLLFFIPF 314
>04_04_1067 -
30545277-30545595,30545693-30545801,30545841-30545970,
30546738-30546904,30546981-30546993
Length = 245
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 396 IDYALPKVTSSSALQDRTFVTREWYKKHQD 307
+DY LP +T S+ L + + ++YK D
Sbjct: 65 LDYPLPTITGSALLDETNLILHDFYKNISD 94
>01_01_0362 -
2843659-2844468,2844669-2844699,2844824-2844903,
2846680-2847831
Length = 690
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 465 QPFPLKGTGYHRYVFVLYKQDKTIDYALPKVT 370
QP KGTG H ++ V+ +DK + + P T
Sbjct: 464 QPSNRKGTGRHTFIHVIDPRDKPLHQSAPTFT 495
>05_04_0096 -
17931061-17931435,17931539-17931620,17932319-17932446,
17932523-17932621,17932739-17932894,17934120-17934194,
17934582-17934749,17934825-17934993,17936640-17936923
Length = 511
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 411 KQDKTIDYALPKVTSSSALQDRTFVTREW--YKKHQDNITPIGLAFYQSDWDYSVRSF 244
+++ I +L +VT+S +RT V EW ++ Q +TP + F W+Y + F
Sbjct: 266 ERNDAIIKSLGRVTNS----ERTVVNVEWGSFRPPQIELTPYDICFNNETWNYYDQGF 319
>04_04_0841 -
28574497-28574883,28575815-28576188,28576262-28576439,
28576816-28576896,28578134-28578361,28578460-28578579,
28578646-28579353,28579471-28579588,28579686-28579978,
28580101-28580169
Length = 851
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3
Query: 663 GNVIKPTEALEAPIITYDSDDSALWTLAFTSLDGHLYENEKEYVHWLV-ANIPGSAIEKG 487
G VI P ++ P D S LA +++D + + W+ A++P S ++
Sbjct: 290 GTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKES 349
Query: 486 ETLVEYLQPFP 454
EYL FP
Sbjct: 350 LNFEEYLNTFP 360
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,450,002
Number of Sequences: 37544
Number of extensions: 369000
Number of successful extensions: 838
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -