Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_A05
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    26   0.43 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.43 
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   4.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.3  

>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 646 RLNYISCTNRQKCAILQIVQN 708
           ++ Y  CT  Q+C+IL+I +N
Sbjct: 49  KIQYRPCTKNQQCSILRINRN 69


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 646 RLNYISCTNRQKCAILQIVQN 708
           ++ Y  CT  Q+C+IL+I +N
Sbjct: 98  KIQYRPCTKNQQCSILRINRN 118


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 678 LPVCAGNVIKPTEALEAPIITYDSDDSALWTLA 580
           LP C  NVI P     +P+++    D+ L  LA
Sbjct: 45  LPFCGPNVINPFFCDMSPLLSLVCADTRLNKLA 77


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 450 SKEMAVNIQQEFHPSL*HYQVY 515
           S +  +N++QE   S+ HY +Y
Sbjct: 444 SYKSGLNLEQEKKDSISHYHLY 465


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,420
Number of Sequences: 438
Number of extensions: 4737
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)