Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_A01
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117203-15|CAD57713.2|  670|Caenorhabditis elegans Hypothetical...    29   2.7  
AL117203-14|CAD57712.2|  587|Caenorhabditis elegans Hypothetical...    29   2.7  
AL117203-13|CAI70420.1|  362|Caenorhabditis elegans Hypothetical...    29   2.7  
AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical...    29   3.6  
AC006808-1|AAF60813.1|  486|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical...    28   6.2  
U39851-8|AAF99879.1|  937|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>AL117203-15|CAD57713.2|  670|Caenorhabditis elegans Hypothetical
           protein Y48C3A.5b protein.
          Length = 670

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -1

Query: 301 NPVPLRYLNPTLVQDKSTIEE-FLDTPW---RALNKHVDVPTDEEVESNPRSRSARLRA 137
           +P P R     L+Q +ST+++  +D P+    + ++ ++VPT +E  + P   S R R+
Sbjct: 282 DPNPYRQFYEPLIQTRSTVQDVIIDDPYVLQVSSSRRLEVPTIQEPPAPPAMPSERRRS 340


>AL117203-14|CAD57712.2|  587|Caenorhabditis elegans Hypothetical
           protein Y48C3A.5a protein.
          Length = 587

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -1

Query: 301 NPVPLRYLNPTLVQDKSTIEE-FLDTPW---RALNKHVDVPTDEEVESNPRSRSARLRA 137
           +P P R     L+Q +ST+++  +D P+    + ++ ++VPT +E  + P   S R R+
Sbjct: 282 DPNPYRQFYEPLIQTRSTVQDVIIDDPYVLQVSSSRRLEVPTIQEPPAPPAMPSERRRS 340


>AL117203-13|CAI70420.1|  362|Caenorhabditis elegans Hypothetical
           protein Y48C3A.5c protein.
          Length = 362

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -1

Query: 301 NPVPLRYLNPTLVQDKSTIEE-FLDTPW---RALNKHVDVPTDEEVESNPRSRSARLRA 137
           +P P R     L+Q +ST+++  +D P+    + ++ ++VPT +E  + P   S R R+
Sbjct: 57  DPNPYRQFYEPLIQTRSTVQDVIIDDPYVLQVSSSRRLEVPTIQEPPAPPAMPSERRRS 115


>AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.6 protein.
          Length = 271

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +1

Query: 382 IYH*FLNNILTTPCHN*FHLTHCSQIYVMLGRPLWHLTEVFVVYPV 519
           IYH ++   + T  H  +H+ +   IY     P++H+  ++ +Y +
Sbjct: 25  IYHIYIPYTIYT-IHQIYHIYYIYHIYTYTKSPIYHIHHIYQIYHI 69


>AC006808-1|AAF60813.1|  486|Caenorhabditis elegans Hypothetical
           protein Y58G8A.1 protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 300 LATSLIMLPAICLFTIVSSNEWKLIVTNLPLI 395
           +A+S +  PA+ L+     N W L +T LP I
Sbjct: 102 IASSKLWQPALQLYNSARGNSWSLYLTGLPAI 133


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
           protein F55H12.3 protein.
          Length = 2972

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -1

Query: 310 EVANPVPLRYLNPTLVQDKSTIEEFLDTPWRALNKHVD 197
           E  NP  ++Y N T++   S+ ++ +  P  +L+ HVD
Sbjct: 450 EGLNPATIQYNNSTVILPPSSFKKLMVIPASSLDVHVD 487


>AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical
           protein Y106G6H.12 protein.
          Length = 975

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 20/64 (31%), Positives = 26/64 (40%)
 Frame = +3

Query: 210 FKALQGVSKNSSIVLLSCTKVGFKYRNGTGLATSLIMLPAICLFTIVSSNEWKLIVTNLP 389
           F +L+     +S+   SC K   KYRNG  +   L+ L    L       E    V   P
Sbjct: 604 FASLEQDENRNSVSFGSCGKDSIKYRNGPSIGPRLLSLNGGSLDDEEIDIEMMKEVVKNP 663

Query: 390 LIFK 401
           L FK
Sbjct: 664 LHFK 667


>U39851-8|AAF99879.1|  937|Caenorhabditis elegans Hypothetical
           protein C23G10.8 protein.
          Length = 937

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 220 RALNKHVDVPTDEEVESNPRSRSA 149
           R  +KH+D PT + V  +P SR A
Sbjct: 870 RGRDKHLDTPTKKRVNQSPPSRKA 893


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,362,579
Number of Sequences: 27780
Number of extensions: 290402
Number of successful extensions: 837
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)