Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_A01
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    23   3.1  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   5.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.4  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 225 GVSKNSSIVLLSCTKVGF-KYRNGTGLATSLIMLPAICLFTIV 350
           GV   +S ++ S     +   ++GTG+A   +M P + + +I+
Sbjct: 14  GVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSII 56


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 5  SYILELMLQCLICTC*MH 58
          S +L L++ CLIC+  +H
Sbjct: 4  SILLSLLITCLICSPSVH 21


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 220 SKVYPKTPQLYF-YLALKLGSST 285
           +++YPK P LY+ +  L+ G  T
Sbjct: 20  NEMYPKDPYLYYDFYPLERGELT 42


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 220 SKVYPKTPQLYF-YLALKLGSST 285
           +++YPK P LY+ +  L+ G  T
Sbjct: 35  NEMYPKDPYLYYDFYPLERGELT 57


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 525 RSDWINYKDLSQMPQR 478
           +SDW +Y ++S+  Q+
Sbjct: 496 KSDWFDYSEVSKWVQK 511


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,300
Number of Sequences: 438
Number of extensions: 3674
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)