Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P21
         (351 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   0.52 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   0.52 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.52 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.52 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   8.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   8.5  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 0.52
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 185 PGCWSTSSITATSNKIITKKYVVYSVLSK 271
           PGC+S     A  +K + KKY   S  +K
Sbjct: 228 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 256


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 0.52
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 185 PGCWSTSSITATSNKIITKKYVVYSVLSK 271
           PGC+S     A  +K + KKY   S  +K
Sbjct: 542 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 570


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.52
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 185 PGCWSTSSITATSNKIITKKYVVYSVLSK 271
           PGC+S     A  +K + KKY   S  +K
Sbjct: 775 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 803


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.52
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 185 PGCWSTSSITATSNKIITKKYVVYSVLSK 271
           PGC+S     A  +K + KKY   S  +K
Sbjct: 775 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 803


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 4   LSSNKMFGIRHFLRAXNQIFXHVAQQRHMRVI 99
           LS+   FG RH L   NQ+         +R++
Sbjct: 174 LSAANFFGARHGLETLNQLIWFDEVVNELRIL 205


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 1   SLSSNKMFGIRHFLRAXNQIFXH 69
           ++ ++ +FG RH L   NQ+  +
Sbjct: 165 TIIADNVFGGRHGLETLNQLIIY 187


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -1

Query: 252 TTYFFVIILLLVAVMLDVDQHPGW 181
           T Y+F+ + LL+  ++ V  +  W
Sbjct: 318 TVYYFISLGLLILRLVSVCFYGSW 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,450
Number of Sequences: 336
Number of extensions: 1255
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)