Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_P21
(351 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118790-1|AAM50650.1| 68|Drosophila melanogaster GH15688p pro... 38 0.003
AE014296-3570|AAF51742.1| 68|Drosophila melanogaster CG7181-PA... 38 0.003
AF181636-1|AAD55422.1| 682|Drosophila melanogaster BcDNA.GH0726... 27 5.1
AE014134-2078|AAS64682.1| 682|Drosophila melanogaster CG31705-P... 27 5.1
AE014134-2077|AAS64681.1| 682|Drosophila melanogaster CG31705-P... 27 5.1
AE014134-2076|AAF53106.2| 682|Drosophila melanogaster CG31705-P... 27 5.1
M31162-1|AAA28859.1| 448|Drosophila melanogaster protein ( D.me... 27 6.7
AY089622-1|AAL90360.1| 448|Drosophila melanogaster RE35772p pro... 27 6.7
AY061501-1|AAL29049.1| 448|Drosophila melanogaster LD46049p pro... 27 6.7
AE014134-1210|AAF52471.1| 448|Drosophila melanogaster CG8749-PA... 27 6.7
AY089665-1|AAL90403.1| 383|Drosophila melanogaster RH33377p pro... 27 8.9
AE014296-2151|AAF49910.1| 383|Drosophila melanogaster CG10646-P... 27 8.9
>AY118790-1|AAM50650.1| 68|Drosophila melanogaster GH15688p
protein.
Length = 68
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 76 QQRHMRVICTPPSNKVSXGEXIFLASLMVVGWSAIPAWVLVNIKHYR 216
Q R V+ PP+ ++S E + L M IPAWVL +I+ Y+
Sbjct: 19 QSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65
>AE014296-3570|AAF51742.1| 68|Drosophila melanogaster CG7181-PA
protein.
Length = 68
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 76 QQRHMRVICTPPSNKVSXGEXIFLASLMVVGWSAIPAWVLVNIKHYR 216
Q R V+ PP+ ++S E + L M IPAWVL +I+ Y+
Sbjct: 19 QSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65
>AF181636-1|AAD55422.1| 682|Drosophila melanogaster BcDNA.GH07269
protein.
Length = 682
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 144 PRQPDGGGLVCHPSLGVGQHQALPRQAIKLSQ 239
P P GGG++C P G P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568
>AE014134-2078|AAS64682.1| 682|Drosophila melanogaster CG31705-PC,
isoform C protein.
Length = 682
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 144 PRQPDGGGLVCHPSLGVGQHQALPRQAIKLSQ 239
P P GGG++C P G P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568
>AE014134-2077|AAS64681.1| 682|Drosophila melanogaster CG31705-PB,
isoform B protein.
Length = 682
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 144 PRQPDGGGLVCHPSLGVGQHQALPRQAIKLSQ 239
P P GGG++C P G P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568
>AE014134-2076|AAF53106.2| 682|Drosophila melanogaster CG31705-PA,
isoform A protein.
Length = 682
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 144 PRQPDGGGLVCHPSLGVGQHQALPRQAIKLSQ 239
P P GGG++C P G P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568
>M31162-1|AAA28859.1| 448|Drosophila melanogaster protein (
D.melanogaster U1 70Ksmall nuclear ribonucleoprotein
gene, complete cds. ).
Length = 448
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 217 RGNA*C*PTPRLGWQTSPPPSGWR 146
RGNA P P G Q+S PS WR
Sbjct: 424 RGNASTNPNPDNGQQSSGDPSWWR 447
>AY089622-1|AAL90360.1| 448|Drosophila melanogaster RE35772p
protein.
Length = 448
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 217 RGNA*C*PTPRLGWQTSPPPSGWR 146
RGNA P P G Q+S PS WR
Sbjct: 424 RGNASTNPNPDNGQQSSGDPSWWR 447
>AY061501-1|AAL29049.1| 448|Drosophila melanogaster LD46049p
protein.
Length = 448
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 217 RGNA*C*PTPRLGWQTSPPPSGWR 146
RGNA P P G Q+S PS WR
Sbjct: 424 RGNASTNPNPDNGQQSSGDPSWWR 447
>AE014134-1210|AAF52471.1| 448|Drosophila melanogaster CG8749-PA
protein.
Length = 448
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 217 RGNA*C*PTPRLGWQTSPPPSGWR 146
RGNA P P G Q+S PS WR
Sbjct: 424 RGNASTNPNPDNGQQSSGDPSWWR 447
>AY089665-1|AAL90403.1| 383|Drosophila melanogaster RH33377p
protein.
Length = 383
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 177 GRPAHHHQAGEEDXLTXGNLVAWRSADNAH 88
G+ +HHHQ + L GNL A+ D H
Sbjct: 188 GKWSHHHQGHQFLTLQDGNLSAYDVRDTQH 217
>AE014296-2151|AAF49910.1| 383|Drosophila melanogaster CG10646-PA
protein.
Length = 383
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 177 GRPAHHHQAGEEDXLTXGNLVAWRSADNAH 88
G+ +HHHQ + L GNL A+ D H
Sbjct: 188 GKWSHHHQGHQFLTLQDGNLSAYDVRDTQH 217
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,634,818
Number of Sequences: 53049
Number of extensions: 258651
Number of successful extensions: 895
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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