Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_P16
(492 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 89 3e-20
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 89 3e-20
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 83 1e-18
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 77 9e-17
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.86
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.86
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.86
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.86
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.86
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 24 0.86
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.0
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 4.6
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 4.6
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 88.6 bits (210), Expect = 3e-20
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 88.6 bits (210), Expect = 3e-20
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 88.6 bits (210), Expect = 3e-20
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 88.6 bits (210), Expect = 3e-20
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 88.6 bits (210), Expect = 3e-20
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 88.6 bits (210), Expect = 3e-20
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 88.6 bits (210), Expect = 3e-20
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 88.6 bits (210), Expect = 3e-20
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 88.6 bits (210), Expect = 3e-20
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 86.2 bits (204), Expect = 1e-19
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
+VKAKIQ K GIPP+QQR IFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 405 NVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLV 450
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 83.0 bits (196), Expect = 1e-18
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +1
Query: 22 KIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 147
KIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 42
Score = 74.5 bits (175), Expect = 5e-16
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 129
+VKAKIQ K GIPP+QQR IFAGKQLEDGRTLSDYNIQKE
Sbjct: 73 NVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 77.0 bits (181), Expect = 9e-17
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +1
Query: 10 HVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 129
+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.86
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 420 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 334
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.86
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 420 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 334
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.86
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 420 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 334
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.86
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 420 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 334
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.86
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 420 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 334
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 23.8 bits (49), Expect = 0.86
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 311 CSPVHSRRRRWILPFSSTL*NLRTASLTFFFLCLIF 204
C P S R + + FS+T L A +TF + L F
Sbjct: 253 CRPTFSAARFYGIDFSNTFLGLVGAVVTFLIVLLQF 288
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 2.0
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -3
Query: 163 HHEASTPGGGWIPSGYCSPR 104
HH P GG P G PR
Sbjct: 63 HHYGGPPSGGQPPQGMPYPR 82
Score = 21.4 bits (43), Expect = 4.6
Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -1
Query: 357 VVTVLH-HRHEHSGAAL 310
VV+ H H+H+H GAA+
Sbjct: 18 VVSAEHPHQHQHYGAAV 34
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.4 bits (43), Expect = 4.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 135 GGFLLDIVVREGTSIFQLLSS 73
GGFLL VV+ G ++ LSS
Sbjct: 108 GGFLLCKVVKYGQTLGPYLSS 128
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 4.6
Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -1
Query: 357 VVTVLH-HRHEHSGAAL 310
VV+ H H+H+H GAA+
Sbjct: 18 VVSAEHPHQHQHYGAAV 34
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,642
Number of Sequences: 336
Number of extensions: 1865
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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