Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P14
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149           30   2.3  
12_02_0649 + 21502917-21503228                                         28   7.1  
09_03_0102 - 12377512-12377737,12378250-12378374,12378756-123789...    28   7.1  
02_01_0006 - 42752-43816                                               28   7.1  
01_06_0654 + 30911416-30912071,30913664-30914348                       28   7.1  
11_06_0600 + 25401849-25402175                                         28   9.4  
01_07_0305 - 42631214-42631330,42631423-42631527,42633208-426332...    28   9.4  
01_06_1320 + 36272716-36273339,36274222-36275762,36276349-362764...    28   9.4  

>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
          Length = 297

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 335 PPLGRPTHATPSGPWSPLARWREQGTEALQFRKTI 231
           P +      + SGPW  L RWR+  + A+Q RK++
Sbjct: 225 PSISGGDRGSRSGPWRQLKRWRKVASRAVQ-RKSL 258


>12_02_0649 + 21502917-21503228
          Length = 103

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 392 VIMANLGGELCPLMSSSGRLW 454
           ++  +LGGEL P++ ++G LW
Sbjct: 82  IMSLHLGGELIPMLKNAGALW 102


>09_03_0102 -
           12377512-12377737,12378250-12378374,12378756-12378941,
           12379469-12379609,12379972-12380114,12380515-12380707
          Length = 337

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
 Frame = +2

Query: 191 IPILEVIQLLIIALSSFEIGEPLYPAHANVPVATTDRKA*RG*ASQEVDR*SAKGRENQL 370
           I +L + Q L   L      +P Y AH +V          +G A           R  + 
Sbjct: 151 IDVLRIFQQLCEGLKHMHSFDPPY-AHNDVKTGNVLITHRKGQAPLATLMDFGSARPARK 209

Query: 371 EIRS-AEAVIMANLGGELCPLMSSSGRLWDC 460
           EIRS AEA+ +     E C     +  LWDC
Sbjct: 210 EIRSRAEALRLQEWAAEHCSAPYRAPELWDC 240


>02_01_0006 - 42752-43816
          Length = 354

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 271 RQRASGDHGPEGVAWVGLPRGGPMIC*RSRESARNPQRRS 390
           R   +G+    GV W  LP   P++  +SRE  +NP + S
Sbjct: 29  RPTKAGNGSLGGVGWGRLPPPLPLVFPKSREVGQNPSQTS 68


>01_06_0654 + 30911416-30912071,30913664-30914348
          Length = 446

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = -1

Query: 323 RPTHATPSG--PWSPLARWREQG-TEALQFR 240
           +PT A P+   PW+ L  WRE+G  +AL +R
Sbjct: 301 QPTGAGPASWKPWARLEAWRERGPVDALGYR 331


>11_06_0600 + 25401849-25402175
          Length = 108

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 374 IRSAEAVIMANLGGELCPLMSSSGRLW 454
           +  A  V+  +L GEL P++ ++G LW
Sbjct: 81  VGGANRVMSLHLAGELVPMLKNAGALW 107


>01_07_0305 -
           42631214-42631330,42631423-42631527,42633208-42633216,
           42635198-42636142,42636349-42636450,42637210-42637302
          Length = 456

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 20/54 (37%), Positives = 23/54 (42%)
 Frame = +1

Query: 217 ANNRSIVFRNWRASVPCSRQRASGDHGPEGVAWVGLPRGGPMIC*RSRESARNP 378
           A N SI    WR      R R S  H P    W+ + RGG   C R R  +R P
Sbjct: 295 APNDSICAALWRRRGWRQRGRRSPAHPP----WLRMGRGGGARCSRRRGRSRRP 344


>01_06_1320 +
           36272716-36273339,36274222-36275762,36276349-36276490,
           36276622-36276729,36276814-36277026,36277113-36277223,
           36278056-36278250,36278874-36279048,36279189-36279226
          Length = 1048

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -1

Query: 338 GPPLGRPTHATPSGPWSPL 282
           G PLG P  A+PSGP SPL
Sbjct: 645 GSPLGSPV-ASPSGPGSPL 662


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,666,755
Number of Sequences: 37544
Number of extensions: 341400
Number of successful extensions: 875
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)