Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P14
         (767 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122220-1|AAM52732.1|  273|Drosophila melanogaster LP11234p pro...    29   5.3  
AE014134-937|AAN10546.1|  273|Drosophila melanogaster CG6957-PB,...    29   5.3  
AE014134-936|AAF52263.1|  273|Drosophila melanogaster CG6957-PA,...    29   5.3  

>AY122220-1|AAM52732.1|  273|Drosophila melanogaster LP11234p
           protein.
          Length = 273

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 329 LGRPTHATPSGPWSPLARWREQGTEALQFRKT 234
           LG PT +TP G +  L  + +QG  + Q+ KT
Sbjct: 37  LGLPTGSTPLGMYKELIEFHKQGKVSFQYVKT 68


>AE014134-937|AAN10546.1|  273|Drosophila melanogaster CG6957-PB,
           isoform B protein.
          Length = 273

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 329 LGRPTHATPSGPWSPLARWREQGTEALQFRKT 234
           LG PT +TP G +  L  + +QG  + Q+ KT
Sbjct: 37  LGLPTGSTPLGMYKELIEFHKQGKVSFQYVKT 68


>AE014134-936|AAF52263.1|  273|Drosophila melanogaster CG6957-PA,
           isoform A protein.
          Length = 273

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 329 LGRPTHATPSGPWSPLARWREQGTEALQFRKT 234
           LG PT +TP G +  L  + +QG  + Q+ KT
Sbjct: 37  LGLPTGSTPLGMYKELIEFHKQGKVSFQYVKT 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,208,492
Number of Sequences: 53049
Number of extensions: 595900
Number of successful extensions: 1218
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)