Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_P14
(767 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 4.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.5
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 5.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 7.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.5
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 395 IMANLGGELCPLMSSSGRLWDCYFNFFIINLFTSFNLNTNREDFSHRSAE 544
+ NL E P +S + L YFN + + +S L +F HR+ +
Sbjct: 306 VFLNLVAETLPQVSDAIPLLGSYFNCIMFMVASSVVLTVLVLNFHHRTPD 355
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.1
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 395 IMANLGGELCPLMSSSGRLWDCYFNFFIINLFTSFNLNTNREDFSHRSAE 544
+ NL E P S + L YFN + + +S L +F HR+ +
Sbjct: 306 VFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVVLTVLVLNFHHRTPD 355
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1
Query: 341 IGPPLGRPTHAT 306
+GPP+G PT+A+
Sbjct: 1759 MGPPVGHPTNAS 1770
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 395 IMANLGGELCPLMSSSGRLWDCYFNFFIINLFTSFNLNTNREDFSHRSAE 544
+ NL E P +S + L YFN + + +S L F HR+ +
Sbjct: 238 VFLNLVAETLPQVSDAIPLLGSYFNCIMFMVASSVVLTVLVLIFHHRTPD 287
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 395 IMANLGGELCPLMSSSGRLWDCYFNFFIINLFTSFNLNTNREDFSHRSAE 544
+ NL E P +S + L YFN + + +S L F HR+ +
Sbjct: 238 VFLNLVAETLPQVSDAIPLLGSYFNCIMFMVASSVVLTVLVLIFHHRTPD 287
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 395 IMANLGGELCPLMSSSGRLWDCYFNFFIINLFTSFNLNTNREDFSHRSAE 544
+ NL E P +S + L YFN + + +S L F HR+ +
Sbjct: 238 VFLNLVAETLPQVSDAIPLLGSYFNCIMFMVASSVVLTVLVLIFHHRTPD 287
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 458 CYFNFFIINLFTSF 499
C+ FF++NL++ F
Sbjct: 347 CWLPFFVVNLWSGF 360
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = +2
Query: 113 LKSAKTFECVLIMFLQAIALFQVKILIPILEVIQLLIIALSSFE 244
+ + + F+ V I+F + ++ I +EV+ +L S F+
Sbjct: 414 IDTCEMFDSVSILFSDVVTFTEICSRITPMEVVSMLNAMYSLFD 457
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.5
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 395 IMANLGGELCPLMSSSGRLWDCYFNFFIINLFTSFNLNTNREDFSHRSAE 544
+ NL E P S + L YFN + + +S L F HR+ +
Sbjct: 238 VFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVVLTVLVLIFHHRTPD 287
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.5
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 395 IMANLGGELCPLMSSSGRLWDCYFNFFIINLFTSFNLNTNREDFSHRSAE 544
+ NL E P S + L YFN + + +S L F HR+ +
Sbjct: 238 VFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVVLTVLVLIFHHRTPD 287
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.5
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 395 IMANLGGELCPLMSSSGRLWDCYFNFFIINLFTSFNLNTNREDFSHRSAE 544
+ NL E P S + L YFN + + +S L F HR+ +
Sbjct: 238 VFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVVLTVLVLIFHHRTPD 287
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 572 IMINNEESISHFTFDR 619
+MINN+ ++ F FD+
Sbjct: 876 LMINNKYALKFFPFDK 891
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,039
Number of Sequences: 438
Number of extensions: 4535
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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