Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P13
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   9.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 43  TKVTIXFGHINHK*YIFVXKMARRYDTRTTI 135
           T + + FG++    Y+F+   +R+ DT T +
Sbjct: 284 TAMVMWFGYVIDTMYLFIHIRSRQEDTDTLV 314


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 43  TKVTIXFGHINHK*YIFVXKMARRYDTRTTI 135
           T + + FG++    Y+F+   +R+ DT T +
Sbjct: 240 TAMVMWFGYVIDTMYLFIHIRSRQEDTDTLV 270


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
 Frame = +2

Query: 128 QPYSRRKVVCIKSNMLWKL*VMREHRWV------F*QRMVFFWLQN 247
           +PYS+ + + ++   L+   V ++ RW         +R V  W QN
Sbjct: 248 KPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQN 293


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 88  IFVXKMARRYDTRT 129
           + + +MARRYD +T
Sbjct: 398 VMMFRMARRYDVQT 411


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 571 HSFHWDQTGRADNHSAYPSP 512
           HS  W Q G A + S  P P
Sbjct: 198 HSGFWGQLGAAVDESRTPRP 217


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 186 YSFHSIFDLIQTTFRREYGCTGIITSCHFLYKYILFVI 73
           YS +   D++   + REY    +     F Y Y L VI
Sbjct: 128 YSGYVWTDILGFGYFREYLAEAVQLYFQFYYTYFLCVI 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,016
Number of Sequences: 336
Number of extensions: 4052
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)