Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_P13
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 260 1e-70
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 136 3e-33
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 134 1e-32
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 132 3e-32
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 111 1e-25
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 102 6e-23
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 89 4e-19
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 46 4e-06
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 30 0.36
SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr 3|... 27 3.4
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.9
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 25 7.9
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 25 7.9
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 25 7.9
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.9
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 260 bits (638), Expect = 1e-70
Identities = 118/197 (59%), Positives = 155/197 (78%)
Frame = +1
Query: 103 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 282
M+R YD+RTTIFSPEGRLYQVEYA+EAI+HAG +LGI+A DGI+LAAE++ T+KLL++
Sbjct: 1 MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEE 60
Query: 283 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 462
+EK+Y + D+M+C+VAG+T+DAN+L N R + Q+YL + E +PCEQLV +CD+KQ
Sbjct: 61 SAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQG 120
Query: 463 YTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 642
YTQYGG RPFGVS LY GWD GYQL+QS+PSGNYG W+A IG NS + S ++QEYK
Sbjct: 121 YTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYK 180
Query: 643 ENETTLAEAQALXIKVL 693
+ + L EA A+ +K L
Sbjct: 181 D-DINLDEASAMAVKFL 196
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 136 bits (329), Expect = 3e-33
Identities = 77/182 (42%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Frame = +1
Query: 103 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 282
M +Y T FSP G+L Q+EYA+ A++ TS+GI ATDG++LA E++ T++L
Sbjct: 1 MTDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGAS 60
Query: 283 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQ-RYLLQYGESIPCEQLVSWLCDVKQ 459
EK+ + D+ +G+ D VL ++ R +AQ Y Y E P + LV + V Q
Sbjct: 61 L-EKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQ 119
Query: 460 AYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEY 639
TQ GG RPFGVS+L G D+ G LYQ DPSG Y WKAT IG +S AA + L++ Y
Sbjct: 120 ESTQSGGVRPFGVSLLVAGMDEK-GPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRY 178
Query: 640 KE 645
+
Sbjct: 179 ND 180
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 134 bits (324), Expect = 1e-32
Identities = 75/199 (37%), Positives = 116/199 (58%), Gaps = 6/199 (3%)
Frame = +1
Query: 115 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 294
YD FSPEGRL+QVEYA+EAI T++G+ D ++L E+R T+ L+ E EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLM-ESHSVEK 66
Query: 295 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ- 471
+++++ + C+++G+T+DA + R+ Q + Y E E +CD+ + +
Sbjct: 67 LFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEG 126
Query: 472 YGGK-----RPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQE 636
G+ RPFGV++L G D+H G QLY S+PSG Y ++A IG+ S A S L +E
Sbjct: 127 EDGEERIMSRPFGVALLIAGIDEH-GPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKE 185
Query: 637 YKENETTLAEAQALXIKVL 693
+ + TL EA+ L +KVL
Sbjct: 186 F-HKDMTLEEAEVLILKVL 203
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 132 bits (320), Expect = 3e-32
Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 1/178 (0%)
Frame = +1
Query: 115 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 294
YD ++FSP+GRL QVEY EA+ T++ + + I++ ER+N KL + F +K
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNF-QK 62
Query: 295 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQY 474
I +++ + + AG+ +DA +L ++ R+ AQ + L + + E L ++ V+Q YTQ
Sbjct: 63 IAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQS 122
Query: 475 GGKRPFGVSILYMGWDKHYGY-QLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKE 645
GG RPFGVS L G+D ++YQ++P+G Y WKAT IG S AA L++ +KE
Sbjct: 123 GGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKE 180
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 111 bits (266), Expect = 1e-25
Identities = 57/182 (31%), Positives = 100/182 (54%), Gaps = 1/182 (0%)
Frame = +1
Query: 106 ARRYDTRTTIFSPEGRLYQVEYAMEAISHAG-TSLGILATDGILLAAERRNTNKLLDEVF 282
AR +D T+FSPEGRLYQVEYA +A ++AG TS+G+ + + ++++ +KL+D
Sbjct: 4 ARGFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDAST 63
Query: 283 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 462
++ + + C + G +DA + R A + + G +PC+ L + ++ Q
Sbjct: 64 VKH-VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQV 122
Query: 463 YTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 642
TQ RP GV++ + D G L++ DP+G Y G+KAT G ++ L++ +K
Sbjct: 123 STQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFK 182
Query: 643 EN 648
++
Sbjct: 183 KD 184
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 102 bits (244), Expect = 6e-23
Identities = 56/168 (33%), Positives = 97/168 (57%)
Frame = +1
Query: 112 RYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSE 291
+YD T +SP+GRL+QVEYA+EAI ++G+++ +L A +RN +L + +
Sbjct: 5 QYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSS---YQK 61
Query: 292 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ 471
K+ +++D + ++AG+ DA VL+N ++ A + IP +L+S + + Q TQ
Sbjct: 62 KLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQ 121
Query: 472 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAA 615
G+RP+GV L +G+D+ G L + PSG + T +G+ S +A
Sbjct: 122 EYGRRPYGVGFLVIGYDES-GPHLLEFQPSGLVLEYLGTSMGSRSQSA 168
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 89.4 bits (212), Expect = 4e-19
Identities = 53/166 (31%), Positives = 82/166 (49%)
Frame = +1
Query: 136 FSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDD 315
FSP+GRL+Q EYA +A+ +A T +GI DG++LA E+ T+KLL + + +I ++
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLL-KPRVNNRIGSVDRH 72
Query: 316 MVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFG 495
+ + G D + R A + YG IP + L + Q +T Y RPFG
Sbjct: 73 IGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFG 132
Query: 496 VSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQ 633
V +D G LY +P+G Y G+ G A + L++
Sbjct: 133 VMSFVATYDSE-GPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEK 177
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 46.4 bits (105), Expect = 4e-06
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Frame = +1
Query: 184 ISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCSVAGITSDANVLT 363
+ + GT++ I +LA + R+ N F +++++ DD+V +G +DA L
Sbjct: 10 VQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALAL- 68
Query: 364 NELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKR--PFGVSILYMGWDKHYGY 537
++ I QR L + S C V+ T GKR P+ V G DK
Sbjct: 69 --VKRIQQRIDLYHDNHERKMSAQSCACMVR---TLLYGKRFFPYYVYTTVAGIDKEGKG 123
Query: 538 QLYQSDPSGNYGGWKATCIGNNSAA 612
++Y DP G+Y + C SAA
Sbjct: 124 EIYSFDPVGSYE--REWCRAGGSAA 146
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 29.9 bits (64), Expect = 0.36
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 607 HYCYRCMLLSTPHSFHWDQTGRADNHSAYPSPYT 506
HYC +C + P S+H R N + P+T
Sbjct: 400 HYCLKCFQVKPPRSYHCGACKRCINRYDHHCPWT 433
>SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 531
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 214 LATDGILLAAERRNTNKLLDEVFFSE 291
L + GIL +R+NT L+ V++SE
Sbjct: 6 LLSKGILSIIKRKNTGNLIPHVYYSE 31
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.8 bits (54), Expect = 5.9
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 371 NSFVKTLASDVIPATEQTMSSLSL*IFSEKNTSSRSLLVFLRSA-AKRIPSVAKIPSDVP 195
NSF TL +D +P SL +F + T SR L F+R + PS + +P
Sbjct: 382 NSFDFTLENDQVPPRLIASECTSLEVFIQHITLSRILSHFVRKVYPVKSPSDSHCKVSLP 441
Query: 194 A 192
A
Sbjct: 442 A 442
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 411 FAILQQVSLSDQS*FVCQNVSIRCYTSD*TDHVIIELVDF 292
FA++ V L D V QN+ + +TS HV+ ++DF
Sbjct: 898 FAMVWLVDLEDN---VEQNIRVPIFTSSKPAHVLQNMIDF 934
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 342 CYTSD*TDHVIIELVDFFRKEHF 274
CY+ + H +LVD F K HF
Sbjct: 63 CYSCSISCHADHDLVDLFNKRHF 85
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 367 ELRLIAQRYLLQYGESIPCEQLVS---WLCDVKQAYTQY 474
EL + RYLLQ+G S EQ + WL + + T Y
Sbjct: 728 ELLKKSTRYLLQFGLSTSLEQQIPTPYWLAPLNLSCTDY 766
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.4 bits (53), Expect = 7.9
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -3
Query: 449 SQSQETNCSQGIDSPYCSRYL*AISLNSFVKTLASDVIPATEQTMSSLSL*IFSEKNTSS 270
+QSQ+ N +G S S + SL S + +S P+T + SS S S + SS
Sbjct: 103 AQSQQFNIVEGAASSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSS 162
Query: 269 RS 264
S
Sbjct: 163 SS 164
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,028,028
Number of Sequences: 5004
Number of extensions: 66389
Number of successful extensions: 176
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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