Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_P12
(766 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 334 1e-91
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 334 2e-91
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 334 2e-91
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 334 2e-91
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 334 2e-91
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 334 2e-91
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 332 8e-91
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 174 3e-43
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 3e-41
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 126 7e-29
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 334 bits (822), Expect = 1e-91
Identities = 152/228 (66%), Positives = 180/228 (78%)
Frame = +2
Query: 80 LGFVKVVXHKQSFKRSQVKFKRRRXGXTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 259
+GFVKVV +K FKR QVKF+RRR G TDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 260 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 439
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 440 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 619
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 620 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFXKYIK 763
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF +YIK
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDEDAYKKQFSQYIK 228
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 334 bits (821), Expect = 2e-91
Identities = 152/228 (66%), Positives = 180/228 (78%)
Frame = +2
Query: 80 LGFVKVVXHKQSFKRSQVKFKRRRXGXTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 259
+GFVKVV +K FKR QVKF+RRR G TDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 260 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 439
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 440 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 619
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 620 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFXKYIK 763
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF +YIK
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 334 bits (821), Expect = 2e-91
Identities = 152/228 (66%), Positives = 180/228 (78%)
Frame = +2
Query: 80 LGFVKVVXHKQSFKRSQVKFKRRRXGXTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 259
+GFVKVV +K FKR QVKF+RRR G TDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 260 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 439
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 440 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 619
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 620 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFXKYIK 763
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF +YIK
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 334 bits (821), Expect = 2e-91
Identities = 152/228 (66%), Positives = 180/228 (78%)
Frame = +2
Query: 80 LGFVKVVXHKQSFKRSQVKFKRRRXGXTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 259
+GFVKVV +K FKR QVKF+RRR G TDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 260 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 439
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 440 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 619
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 620 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFXKYIK 763
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF +YIK
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 334 bits (821), Expect = 2e-91
Identities = 152/228 (66%), Positives = 180/228 (78%)
Frame = +2
Query: 80 LGFVKVVXHKQSFKRSQVKFKRRRXGXTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 259
+GFVKVV +K FKR QVKF+RRR G TDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 260 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 439
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 440 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 619
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 620 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFXKYIK 763
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF +YIK
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 334 bits (821), Expect = 2e-91
Identities = 152/228 (66%), Positives = 180/228 (78%)
Frame = +2
Query: 80 LGFVKVVXHKQSFKRSQVKFKRRRXGXTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 259
+GFVKVV +K FKR QVKF+RRR G TDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 260 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 439
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127
Query: 440 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 619
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 187
Query: 620 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFXKYIK 763
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF +YIK
Sbjct: 188 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 235
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 332 bits (816), Expect = 8e-91
Identities = 151/228 (66%), Positives = 179/228 (78%)
Frame = +2
Query: 80 LGFVKVVXHKQSFKRSQVKFKRRRXGXTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 259
+GFVKVV +K FKR QVKF+RRR G TDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 260 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 439
CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 440 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 619
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 620 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFXKYIK 763
PGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF +YIK
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 174 bits (423), Expect = 3e-43
Identities = 77/98 (78%), Positives = 90/98 (91%)
Frame = +2
Query: 80 LGFVKVVXHKQSFKRSQVKFKRRRXGXTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 259
+GFVKVV +K FKR QVKF+RRR G TDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 260 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 373
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (407), Expect = 3e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +2
Query: 230 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 409
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 410 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 589
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 590 LNVPH 604
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 126 bits (305), Expect = 7e-29
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = +2
Query: 536 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 715
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 716 QDDEDSFKRQFXKYIK 763
++DED++K+QF +YIK
Sbjct: 61 EEDEDAYKKQFSQYIK 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,135,046
Number of Sequences: 237096
Number of extensions: 2190135
Number of successful extensions: 3967
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3949
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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